SUP2, GU830920.1-SUP2.m1 (mRNA) Fragaria virginiana subsp. virginiana

Transcript Overview
NameSUP2
Unique NameGU830920.1-SUP2.m1
TypemRNA
OrganismFragaria virginiana subsp. virginiana ()
Sourcegenbank
ProductSuperman-like protein FRASUP2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
GU830920regionGU830920:153..731 +NCBI Rosaceae gene and mRNA sequencesn/a
LG3chromosomeSUP2:1..579 .
LG3:7746749..7747327 -		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GU830920.1-SUP2.m1-cds1GU830920.1-SUP2.m1-cds1Fragaria virginiana subsp. virginianaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SUP2GU830920.1-SUP2.p1Fragaria virginiana subsp. virginianapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI292606429
nuccoreGU830920.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>GU830920.1-SUP2.m1 ID=GU830920.1-SUP2.m1; Name=SUP2; organism=Fragaria virginiana subsp. virginiana; type=mRNA; length=579bp
atgaacacttctggcttctgcaaaagcttagtgaaagatccattacacag
tacagtcatgactgaagatgttgaagtctatatgaatgggcacccatggc
ctccaaggtgttacatttgtgacttctgcaagagagaattcaaatgtgct
caatctctgggtggccatatgaatgttcacaggaaagaacgtgccattct
cagaattggtcagtacactcacagtactatacttaatctcaaccttaatc
ctaaccctactttcgtatcctcactaccaccatcattatcatctcccttt
tctactgtttcagctaggcagctctcaccattaactactagctttataag
ctcagtgccttcttggatatcacaatcctctcatcttcctcctcctacat
tttcatcgccatctgctacttgccatactctagatgctaacctttcgggt
ccttcttcaaacttcatgaagtttaatgacgcaaagtctcaagaagaaga
cgagtgcatgaggttggagactggtgttcttggcggtaactcaaaggatg
acatcgatttggagcttcgattaggctaa
back to top

protein sequence of SUP2

>GU830920.1-SUP2.p1 ID=GU830920.1-SUP2.p1; Name=SUP2; organism=Fragaria virginiana subsp. virginiana; type=polypeptide; length=192bp
MNTSGFCKSLVKDPLHSTVMTEDVEVYMNGHPWPPRCYICDFCKREFKCA
QSLGGHMNVHRKERAILRIGQYTHSTILNLNLNPNPTFVSSLPPSLSSPF
STVSARQLSPLTTSFISSVPSWISQSSHLPPPTFSSPSATCHTLDANLSG
PSSNFMKFNDAKSQEEDECMRLETGVLGGNSKDDIDLELRLG
back to top

mRNA from alignment at GU830920:153..731+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>GU830920.1-SUP2.m1 ID=GU830920.1-SUP2.m1; Name=SUP2; organism=Fragaria virginiana subsp. virginiana; type=mRNA; length=579bp; location=Sequence derived from: GU830920:153..731+ (Fragaria virginiana subsp. virginiana
atgaacacttctggcttctgcaaaagcttagtgaaagatccattacacag
tacagtcatgactgaagatgttgaagtctatatgaatgggcacccatggc
ctccaaggtgttacatttgtgacttctgcaagagagaattcaaatgtgct
caatctctgggtggccatatgaatgttcacaggaaagaacgtgccattct
cagaattggtcagtacactcacagtactatacttaatctcaaccttaatc
ctaaccctactttcgtatcctcactaccaccatcattatcatctcccttt
tctactgtttcagctaggcagctctcaccattaactactagctttataag
ctcagtgccttcttggatatcacaatcctctcatcttcctcctcctacat
tttcatcgccatctgctacttgccatactctagatgctaacctttcgggt
ccttcttcaaacttcatgaagtttaatgacgcaaagtctcaagaagaaga
cgagtgcatgaggttggagactggtgttcttggcggtaactcaaaggatg
acatcgatttggagcttcgattaggctaa
back to top

Coding sequence (CDS) from alignment at GU830920:153..731+

>GU830920.1-SUP2.m1 ID=GU830920.1-SUP2.m1; Name=SUP2; organism=Fragaria virginiana subsp. virginiana; type=CDS; length=579bp; location=Sequence derived from: GU830920:153..731+ (Fragaria virginiana subsp. virginiana
atgaacacttctggcttctgcaaaagcttagtgaaagatccattacacag
tacagtcatgactgaagatgttgaagtctatatgaatgggcacccatggc
ctccaaggtgttacatttgtgacttctgcaagagagaattcaaatgtgct
caatctctgggtggccatatgaatgttcacaggaaagaacgtgccattct
cagaattggtcagtacactcacagtactatacttaatctcaaccttaatc
ctaaccctactttcgtatcctcactaccaccatcattatcatctcccttt
tctactgtttcagctaggcagctctcaccattaactactagctttataag
ctcagtgccttcttggatatcacaatcctctcatcttcctcctcctacat
tttcatcgccatctgctacttgccatactctagatgctaacctttcgggt
ccttcttcaaacttcatgaagtttaatgacgcaaagtctcaagaagaaga
cgagtgcatgaggttggagactggtgttcttggcggtaactcaaaggatg
acatcgatttggagcttcgattaggctaa
back to top