PGIP, AF196925.1-PGIP.m1 (mRNA) Prunus dulcis

Transcript Overview


Name	PGIP
Unique Name	AF196925.1-PGIP.m1
Type	mRNA
Organism	Prunus dulcis (Almond)
Source	genbank
Product	polygalacturonase inhibitor protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PGIP	AF196925.1-PGIP	Prunus dulcis	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AF196925.1-PGIP.m1-cds1	AF196925.1-PGIP.m1-cds1	Prunus dulcis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PGIP	AF196925.1-PGIP.p1	Prunus dulcis	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	13873229
nuccore	AF196925.1

Alignments

Feature Name	Type	Location	Analysis
AF196925	region	AF196925:1..751+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AF196925:1..751+
coding sequence from alignment at AF196925:1..751+

mRNA sequence

>AF196925.1-PGIP.m1 ID=AF196925.1-PGIP.m1; Name=PGIP; organism=Prunus dulcis; type=mRNA; length=751bp
tcatggaacccggagacagactgctgtgactggtactctgtcacctgtga
ctccaccacaaaccgcgtcaactccctcaccctcttctccggcggactct
ccggtcaaattccgacccaagtcggtgacttgccgtatcttgaaacactt
gagtttcacaagcaacccaatcttaccggaccaatccaaccctccattac
caagcttaagcgcctcaaggagctgcgcctcagctggaccaacatctccg
gctctgtccctgacttcctcagccaactcaaraacctcacctttcttgaa
ctctcattcaataacctcacgggctccatccccagctcgctttctcagct
tccaaacctagacgctcttcatctagaccgtaacaagctcacaggtcata
ttccgaagtcattcggagaattccatggcagtgttccagacctctatctc
tctcacaaccagctctcaggcaccataccaacctcattagccaaactgga
cttcagcaccatagacttctccaggaacaagctcgaaggcgatgcatcca
tgatctttggattgaacaagactacccagattgtggatctgtcgaggaac
ttgctggaatttaatctatcaaaggtggagttttccaagagcttgacttc
gttggatctcaaccataacaagatcacaggcagtattccggtggggctga
cccaagtggatttgcagttcctgaacgtgagctacaacaggttgtgtggt
c

protein sequence of PGIP

>AF196925.1-PGIP.p1 ID=AF196925.1-PGIP.p1; Name=PGIP; organism=Prunus dulcis; type=polypeptide; length=250bp
SWNPETDCCDWYSVTCDSTTNRVNSLTLFSGGLSGQIPTQVGDLPYLETL
EFHKQPNLTGPIQPSITKLKRLKELRLSWTNISGSVPDFLSQLKNLTFLE
LSFNNLTGSIPSSLSQLPNLDALHLDRNKLTGHIPKSFGEFHGSVPDLYL
SHNQLSGTIPTSLAKLDFSTIDFSRNKLEGDASMIFGLNKTTQIVDLSRN
LLEFNLSKVEFSKSLTSLDLNHNKITGSIPVGLTQVDLQFLNVSYNRLCG

mRNA from alignment at AF196925:1..751+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AF196925.1-PGIP.m1 ID=AF196925.1-PGIP.m1; Name=PGIP; organism=Prunus dulcis; type=mRNA; length=751bp; location=Sequence derived from: AF196925:1..751+ (Prunus dulcis
tcatggaacccggagacagactgctgtgactggtactctgtcacctgtga
ctccaccacaaaccgcgtcaactccctcaccctcttctccggcggactct
ccggtcaaattccgacccaagtcggtgacttgccgtatcttgaaacactt
gagtttcacaagcaacccaatcttaccggaccaatccaaccctccattac
caagcttaagcgcctcaaggagctgcgcctcagctggaccaacatctccg
gctctgtccctgacttcctcagccaactcaaraacctcacctttcttgaa
ctctcattcaataacctcacgggctccatccccagctcgctttctcagct
tccaaacctagacgctcttcatctagaccgtaacaagctcacaggtcata
ttccgaagtcattcggagaattccatggcagtgttccagacctctatctc
tctcacaaccagctctcaggcaccataccaacctcattagccaaactgga
cttcagcaccatagacttctccaggaacaagctcgaaggcgatgcatcca
tgatctttggattgaacaagactacccagattgtggatctgtcgaggaac
ttgctggaatttaatctatcaaaggtggagttttccaagagcttgacttc
gttggatctcaaccataacaagatcacaggcagtattccggtggggctga
cccaagtggatttgcagttcctgaacgtgagctacaacaggttgtgtggt
c

Coding sequence (CDS) from alignment at AF196925:1..751+

>AF196925.1-PGIP.m1 ID=AF196925.1-PGIP.m1; Name=PGIP; organism=Prunus dulcis; type=CDS; length=751bp; location=Sequence derived from: AF196925:1..751+ (Prunus dulcis
tcatggaacccggagacagactgctgtgactggtactctgtcacctgtga
ctccaccacaaaccgcgtcaactccctcaccctcttctccggcggactct
ccggtcaaattccgacccaagtcggtgacttgccgtatcttgaaacactt
gagtttcacaagcaacccaatcttaccggaccaatccaaccctccattac
caagcttaagcgcctcaaggagctgcgcctcagctggaccaacatctccg
gctctgtccctgacttcctcagccaactcaaraacctcacctttcttgaa
ctctcattcaataacctcacgggctccatccccagctcgctttctcagct
tccaaacctagacgctcttcatctagaccgtaacaagctcacaggtcata
ttccgaagtcattcggagaattccatggcagtgttccagacctctatctc
tctcacaaccagctctcaggcaccataccaacctcattagccaaactgga
cttcagcaccatagacttctccaggaacaagctcgaaggcgatgcatcca
tgatctttggattgaacaagactacccagattgtggatctgtcgaggaac
ttgctggaatttaatctatcaaaggtggagttttccaagagcttgacttc
gttggatctcaaccataacaagatcacaggcagtattccggtggggctga
cccaagtggatttgcagttcctgaacgtgagctacaacaggttgtgtggt
c