PGIP, AF196913.1-PGIP.m1 (mRNA) Gillenia stipulata

Transcript Overview


Name	PGIP
Unique Name	AF196913.1-PGIP.m1
Type	mRNA
Organism	Gillenia stipulata ()
Source	genbank
Product	polygalacturonase inhibitor protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PGIP	AF196913.1-PGIP	Gillenia stipulata	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AF196913.1-PGIP.m1-cds1	AF196913.1-PGIP.m1-cds1	Gillenia stipulata	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PGIP	AF196913.1-PGIP.p1	Gillenia stipulata	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	13873211
nuccore	AF196913.1

Alignments

Feature Name	Type	Location	Analysis
AF196913	region	AF196913:1..751+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AF196913:1..751+
coding sequence from alignment at AF196913:1..751+

mRNA sequence

>AF196913.1-PGIP.m1 ID=AF196913.1-PGIP.m1; Name=PGIP; organism=Gillenia stipulata; type=mRNA; length=751bp
tcatggaatccggcccatgactgctgcgactggtactgcgacacctgtga
ctccaccacaaaccgcatcaactccctcaccatcttcgccggccaggtat
ccggtcaaatccccgccctagttggcgacttgccgtaccttgaaaccctc
gaattccacaagcaacccaatctcaccggcccaatccaaccctccattgc
caagctcaaaagcctcaagtttctgaggctcagctggaccaacatctcag
gctctgtccctgacttcctcagccaactcaagaacctcaccttcctcgac
ctctccttcaacaacctcactggcgccatccccagctccctttctcagct
ccccaacctcaactctcttcgtctagaccgcaacaagctcacaggtcata
ttccgaaatcgtttggacagttcagcggcaacgttccagacctcattctc
tcccacaaccagctctcaggcaacattccaacctcattctcccagatgaa
cttcaaccgcatagacttgtcacggaacaagctcgaaggggacgcgtcca
tggtctttggattgaacaagacaacccaaatcgccgacctgtccaggaac
ttactggaatttaatctgtcaaaggtggagtttccgaccagcttgatctc
gctggatatgaaccacaacaagatctatgggagtattccagtggagctta
cccaggtgaatttgcagttcctgaacgtgagctacaacaagctgtgtggt
c

protein sequence of PGIP

>AF196913.1-PGIP.p1 ID=AF196913.1-PGIP.p1; Name=PGIP; organism=Gillenia stipulata; type=polypeptide; length=250bp
SWNPAHDCCDWYCDTCDSTTNRINSLTIFAGQVSGQIPALVGDLPYLETL
EFHKQPNLTGPIQPSIAKLKSLKFLRLSWTNISGSVPDFLSQLKNLTFLD
LSFNNLTGAIPSSLSQLPNLNSLRLDRNKLTGHIPKSFGQFSGNVPDLIL
SHNQLSGNIPTSFSQMNFNRIDLSRNKLEGDASMVFGLNKTTQIADLSRN
LLEFNLSKVEFPTSLISLDMNHNKIYGSIPVELTQVNLQFLNVSYNKLCG

mRNA from alignment at AF196913:1..751+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AF196913.1-PGIP.m1 ID=AF196913.1-PGIP.m1; Name=PGIP; organism=Gillenia stipulata; type=mRNA; length=751bp; location=Sequence derived from: AF196913:1..751+ (Gillenia stipulata
tcatggaatccggcccatgactgctgcgactggtactgcgacacctgtga
ctccaccacaaaccgcatcaactccctcaccatcttcgccggccaggtat
ccggtcaaatccccgccctagttggcgacttgccgtaccttgaaaccctc
gaattccacaagcaacccaatctcaccggcccaatccaaccctccattgc
caagctcaaaagcctcaagtttctgaggctcagctggaccaacatctcag
gctctgtccctgacttcctcagccaactcaagaacctcaccttcctcgac
ctctccttcaacaacctcactggcgccatccccagctccctttctcagct
ccccaacctcaactctcttcgtctagaccgcaacaagctcacaggtcata
ttccgaaatcgtttggacagttcagcggcaacgttccagacctcattctc
tcccacaaccagctctcaggcaacattccaacctcattctcccagatgaa
cttcaaccgcatagacttgtcacggaacaagctcgaaggggacgcgtcca
tggtctttggattgaacaagacaacccaaatcgccgacctgtccaggaac
ttactggaatttaatctgtcaaaggtggagtttccgaccagcttgatctc
gctggatatgaaccacaacaagatctatgggagtattccagtggagctta
cccaggtgaatttgcagttcctgaacgtgagctacaacaagctgtgtggt
c

Coding sequence (CDS) from alignment at AF196913:1..751+

>AF196913.1-PGIP.m1 ID=AF196913.1-PGIP.m1; Name=PGIP; organism=Gillenia stipulata; type=CDS; length=751bp; location=Sequence derived from: AF196913:1..751+ (Gillenia stipulata
tcatggaatccggcccatgactgctgcgactggtactgcgacacctgtga
ctccaccacaaaccgcatcaactccctcaccatcttcgccggccaggtat
ccggtcaaatccccgccctagttggcgacttgccgtaccttgaaaccctc
gaattccacaagcaacccaatctcaccggcccaatccaaccctccattgc
caagctcaaaagcctcaagtttctgaggctcagctggaccaacatctcag
gctctgtccctgacttcctcagccaactcaagaacctcaccttcctcgac
ctctccttcaacaacctcactggcgccatccccagctccctttctcagct
ccccaacctcaactctcttcgtctagaccgcaacaagctcacaggtcata
ttccgaaatcgtttggacagttcagcggcaacgttccagacctcattctc
tcccacaaccagctctcaggcaacattccaacctcattctcccagatgaa
cttcaaccgcatagacttgtcacggaacaagctcgaaggggacgcgtcca
tggtctttggattgaacaagacaacccaaatcgccgacctgtccaggaac
ttactggaatttaatctgtcaaaggtggagtttccgaccagcttgatctc
gctggatatgaaccacaacaagatctatgggagtattccagtggagctta
cccaggtgaatttgcagttcctgaacgtgagctacaacaagctgtgtggt
c