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Transcript Overview
| Name | MATR |
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| Unique Name | DQ110342.1-MATR.m1 |
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| Type | mRNA |
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| Organism | Geum canadense () |
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| Source | genbank |
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| Product | maturase |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| DQ110342.1-MATR.m1-cds1 | DQ110342.1-MATR.m1-cds1 | Geum canadense | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| MATR | DQ110342.1-MATR.p1 | Geum canadense | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| DQ110342 |
region |
DQ110342:1..1788+ |
NCBI Rosaceae gene and mRNA sequences |
Sequences
The
following sequences are available for this feature:
mRNA sequence >DQ110342.1-MATR.m1 ID=DQ110342.1-MATR.m1; Name=MATR; organism=Geum canadense; type=mRNA; length=1788bp
ctatagaaaagatcatgaaagaggcgatcagaatggtactcgaattcatt
tacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggccg
ccactcggccctaagacggatcaaagaagagtggggaacctctcgctggt
ttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcga
ctcatcccaatctttaaggaagagatcgacgatcccaagttcttttacct
cattcagaaagtcttttccgccggacgactcgtaggaggtgagaagggcc
cttattctgtcccacacagtgtactactatcggccctactaggcaacatc
tacctacacaagctcgatcaggagataggtaggatccgacagaagtacga
aattccggttgttcagagaatcggatcggttctattaaggacaggtcgta
ttgatgaccaagaaaactctggagaagaagcaagcttcaacgttccccaa
gacaacagagccatcattgtggggagggtaaagagcatccaacgcaaagc
ggccttaaattcccttgtttcgtcgtggcacaccccccccacaagcaccc
cccggctcaggggggaccagaaaacgcctttctttttccccccttcgtcg
gcccttgcctccttccttaacaagccctcgagcctcctttgcgccgcctt
cctcatagaagctgccgggttgaccccgaaggccgaattctattttagaa
aacgctgtaataataattgggccatgagagaccttattacgtattgcaaa
agaaagggcctgctgatagagctgggcggggaggcgatactagttatcag
gtcagagagacgcctggcccgtaagctggcccccttaaaaacccattact
taaattacttaataaggatttgttacgcgcgatatgccgacgactcacta
ctgggaatcgtgggtgcccgagagcttctcatagaaatacaaaaacgtat
cgcccacttcctacaatccggcctgaaccttttggtaggctccgcaggat
caacaacaatagctgcacggagtacggtagaattccccggtacggtcatt
cgggaagtccctccgaggacgactcccatacaattcttgcgagagctgga
gaagcgtctgcgggtaaagcaccgtatccatataactgcttgccacctac
gctccaccatccattccaagtttaggaacctaggtaatagtatcccgatc
aaacagctgacgaaggggattagcgaaacagggagtctactggacggggt
tcagctagcggacactcttggaacagctggagtaagaagtccccaagtga
gcgtattatgggggaccgtcaagcacatccggcaagaatcaaaggggatc
cccttgttgcatagctcaggtcggagcaaagcgccatcggacgttcaaca
ggcagtctcacgatcgggcatgggtgtccggaagttgtcattgtacactc
ccccgggtcgaaaggcggcggaggaaggaggaggacactggtcgggatct
atcagcagcgaattccccatacagatagaggcgcctatcaaaaagatact
ccgaaggcttcgggatcgaggtatcattagccgaagaagaccctggccaa
tccacgtggcctgcttgacgaacgtcagcgacggagacatcgtaaattgg
tccgcgggcatcgcgataagtcctctgtcctactacaggtgccgcgacaa
cctttaccaagtccgaacgattgtcgaccaccagatcc back to topprotein sequence of MATR >DQ110342.1-MATR.p1 ID=DQ110342.1-MATR.p1; Name=MATR; organism=Geum canadense; type=polypeptide; length=595bp
IEKIMKEAIRMVLEFIYDPEFPDTSHFRSGRGRHSALRRIKEEWGTSRWF
LEFDIRKCFHTIDRHRLIPIFKEEIDDPKFFYLIQKVFSAGRLVGGEKGP
YSVPHSVLLSALLGNIYLHKLDQEIGRIRQKYEIPVVQRIGSVLLRTGRI
DDQENSGEEASFNVPQDNRAIIVGRVKSIQRKAALNSLVSSWHTPPTSTP
RLRGDQKTPFFFPPSSALASFLNKPSSLLCAAFLIEAAGLTPKAEFYFRK
RCNNNWAMRDLITYCKRKGLLIELGGEAILVIRSERRLARKLAPLKTHYL
NYLIRICYARYADDSLLGIVGARELLIEIQKRIAHFLQSGLNLLVGSAGS
TTIAARSTVEFPGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLR
STIHSKFRNLGNSIPIKQLTKGISETGSLLDGVQLADTLGTAGVRSPQVS
VLWGTVKHIRQESKGIPLLHSSGRSKAPSDVQQAVSRSGMGVRKLSLYTP
PGRKAAEEGGGHWSGSISSEFPIQIEAPIKKILRRLRDRGIISRRRPWPI
HVACLTNVSDGDIVNWSAGIAISPLSYYRCRDNLYQVRTIVDHQI back to topmRNA from alignment at DQ110342:1..1788+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >DQ110342.1-MATR.m1 ID=DQ110342.1-MATR.m1; Name=MATR; organism=Geum canadense; type=mRNA; length=1788bp; location=Sequence derived from: DQ110342:1..1788+ (Geum canadense
ctatagaaaagatcatgaaagaggcgatcagaatggtactcgaattcatt
tacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggccg
ccactcggccctaagacggatcaaagaagagtggggaacctctcgctggt
ttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcga
ctcatcccaatctttaaggaagagatcgacgatcccaagttcttttacct
cattcagaaagtcttttccgccggacgactcgtaggaggtgagaagggcc
cttattctgtcccacacagtgtactactatcggccctactaggcaacatc
tacctacacaagctcgatcaggagataggtaggatccgacagaagtacga
aattccggttgttcagagaatcggatcggttctattaaggacaggtcgta
ttgatgaccaagaaaactctggagaagaagcaagcttcaacgttccccaa
gacaacagagccatcattgtggggagggtaaagagcatccaacgcaaagc
ggccttaaattcccttgtttcgtcgtggcacaccccccccacaagcaccc
cccggctcaggggggaccagaaaacgcctttctttttccccccttcgtcg
gcccttgcctccttccttaacaagccctcgagcctcctttgcgccgcctt
cctcatagaagctgccgggttgaccccgaaggccgaattctattttagaa
aacgctgtaataataattgggccatgagagaccttattacgtattgcaaa
agaaagggcctgctgatagagctgggcggggaggcgatactagttatcag
gtcagagagacgcctggcccgtaagctggcccccttaaaaacccattact
taaattacttaataaggatttgttacgcgcgatatgccgacgactcacta
ctgggaatcgtgggtgcccgagagcttctcatagaaatacaaaaacgtat
cgcccacttcctacaatccggcctgaaccttttggtaggctccgcaggat
caacaacaatagctgcacggagtacggtagaattccccggtacggtcatt
cgggaagtccctccgaggacgactcccatacaattcttgcgagagctgga
gaagcgtctgcgggtaaagcaccgtatccatataactgcttgccacctac
gctccaccatccattccaagtttaggaacctaggtaatagtatcccgatc
aaacagctgacgaaggggattagcgaaacagggagtctactggacggggt
tcagctagcggacactcttggaacagctggagtaagaagtccccaagtga
gcgtattatgggggaccgtcaagcacatccggcaagaatcaaaggggatc
cccttgttgcatagctcaggtcggagcaaagcgccatcggacgttcaaca
ggcagtctcacgatcgggcatgggtgtccggaagttgtcattgtacactc
ccccgggtcgaaaggcggcggaggaaggaggaggacactggtcgggatct
atcagcagcgaattccccatacagatagaggcgcctatcaaaaagatact
ccgaaggcttcgggatcgaggtatcattagccgaagaagaccctggccaa
tccacgtggcctgcttgacgaacgtcagcgacggagacatcgtaaattgg
tccgcgggcatcgcgataagtcctctgtcctactacaggtgccgcgacaa
cctttaccaagtccgaacgattgtcgaccaccagatcc back to topCoding sequence (CDS) from alignment at DQ110342:1..1788+ >DQ110342.1-MATR.m1 ID=DQ110342.1-MATR.m1; Name=MATR; organism=Geum canadense; type=CDS; length=1788bp; location=Sequence derived from: DQ110342:1..1788+ (Geum canadense
ctatagaaaagatcatgaaagaggcgatcagaatggtactcgaattcatt
tacgatcccgagtttccagacacatcgcacttccgctcgggtcgaggccg
ccactcggccctaagacggatcaaagaagagtggggaacctctcgctggt
ttttggaattcgacatcaggaagtgttttcacaccatcgaccgacatcga
ctcatcccaatctttaaggaagagatcgacgatcccaagttcttttacct
cattcagaaagtcttttccgccggacgactcgtaggaggtgagaagggcc
cttattctgtcccacacagtgtactactatcggccctactaggcaacatc
tacctacacaagctcgatcaggagataggtaggatccgacagaagtacga
aattccggttgttcagagaatcggatcggttctattaaggacaggtcgta
ttgatgaccaagaaaactctggagaagaagcaagcttcaacgttccccaa
gacaacagagccatcattgtggggagggtaaagagcatccaacgcaaagc
ggccttaaattcccttgtttcgtcgtggcacaccccccccacaagcaccc
cccggctcaggggggaccagaaaacgcctttctttttccccccttcgtcg
gcccttgcctccttccttaacaagccctcgagcctcctttgcgccgcctt
cctcatagaagctgccgggttgaccccgaaggccgaattctattttagaa
aacgctgtaataataattgggccatgagagaccttattacgtattgcaaa
agaaagggcctgctgatagagctgggcggggaggcgatactagttatcag
gtcagagagacgcctggcccgtaagctggcccccttaaaaacccattact
taaattacttaataaggatttgttacgcgcgatatgccgacgactcacta
ctgggaatcgtgggtgcccgagagcttctcatagaaatacaaaaacgtat
cgcccacttcctacaatccggcctgaaccttttggtaggctccgcaggat
caacaacaatagctgcacggagtacggtagaattccccggtacggtcatt
cgggaagtccctccgaggacgactcccatacaattcttgcgagagctgga
gaagcgtctgcgggtaaagcaccgtatccatataactgcttgccacctac
gctccaccatccattccaagtttaggaacctaggtaatagtatcccgatc
aaacagctgacgaaggggattagcgaaacagggagtctactggacggggt
tcagctagcggacactcttggaacagctggagtaagaagtccccaagtga
gcgtattatgggggaccgtcaagcacatccggcaagaatcaaaggggatc
cccttgttgcatagctcaggtcggagcaaagcgccatcggacgttcaaca
ggcagtctcacgatcgggcatgggtgtccggaagttgtcattgtacactc
ccccgggtcgaaaggcggcggaggaaggaggaggacactggtcgggatct
atcagcagcgaattccccatacagatagaggcgcctatcaaaaagatact
ccgaaggcttcgggatcgaggtatcattagccgaagaagaccctggccaa
tccacgtggcctgcttgacgaacgtcagcgacggagacatcgtaaattgg
tccgcgggcatcgcgataagtcctctgtcctactacaggtgccgcgacaa
cctttaccaagtccgaacgattgtcgaccaccagatcc back to top
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