PIP1.1, GQ390798.1-PIP1.1.m1 (mRNA) Fragaria x ananassa

Transcript Overview


Name	PIP1.1
Unique Name	GQ390798.1-PIP1.1.m1
Type	mRNA
Organism	Fragaria x ananassa (Strawberry)
Source	genbank
Product	aquaporin
Genbank Note	water channel

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
GQ390798.1-PIP1.1.m1-cds1	GQ390798.1-PIP1.1.m1-cds1	Fragaria x ananassa	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PIP1.1	GQ390798.1-PIP1.1.p1	Fragaria x ananassa	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	256427015
nuccore	GQ390798.1

Alignments

Feature Name	Type	Location	Analysis
GQ390798	region	GQ390798:38..910+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at GQ390798:38..910+
coding sequence from alignment at GQ390798:38..910+

mRNA sequence

>GQ390798.1-PIP1.1.m1 ID=GQ390798.1-PIP1.1.m1; Name=PIP1.1; organism=Fragaria x ananassa; type=mRNA; length=873bp
atggaggccaaggaggaagatgtgagcttgggagccaacaagtacccgga
gaggcagcccatcggaatcgccgctcagagccaggacgacggcaaggact
acaaggagcctcccccggcaccgcttttcgagcccggcgagctgacgtca
tggtcgttttacagggccgggatcgccgagttcgtcgccacctttctgtt
tctctacatcaccgtcttgactgtgatgggagtcttgaagggtccgacta
agtgccaaaccgtaggtattcaagggatcgcttgggcttttggtggtatg
atcttcgccttggtttactgtaccgccggtatctcagggggtcacataaa
cccggctgtgactttcggccttttcttagccaggaagctgtccttgacta
gggcggtgttctacatcatcatgcagacccttggcgccatagctggagct
gccgtggtgaaagcttttgagaacaagaaccatttcttcgagttgaacgg
tggtggcgccaacagtgtagcccatggctacaccaagggtagtggtcttg
gtgctgaaattattggtacctttgtccttgtctacaccgtcttctccgcc
actgacgccaagcgtagcgccagagactcccatgttccgattttggcccc
gttgccaattgggttcgccgtgttcttggtgcacttagctaccatcccca
ttaccggaacaggtattaacccagctaggagtctcggtgcagccatcatc
tacaacaagaagcatgcctgggatgaccactggatcttctgggttggacc
attcattggtgcagcacttgcagctttgtaccacgtcgtcgtgatcaggg
ccattcctttcaagaataagtga

protein sequence of PIP1.1

>GQ390798.1-PIP1.1.p1 ID=GQ390798.1-PIP1.1.p1; Name=PIP1.1; organism=Fragaria x ananassa; type=polypeptide; length=290bp
MEAKEEDVSLGANKYPERQPIGIAAQSQDDGKDYKEPPPAPLFEPGELTS
WSFYRAGIAEFVATFLFLYITVLTVMGVLKGPTKCQTVGIQGIAWAFGGM
IFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQTLGAIAGA
AVVKAFENKNHFFELNGGGANSVAHGYTKGSGLGAEIIGTFVLVYTVFSA
TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII
YNKKHAWDDHWIFWVGPFIGAALAALYHVVVIRAIPFKNK

mRNA from alignment at GQ390798:38..910+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>GQ390798.1-PIP1.1.m1 ID=GQ390798.1-PIP1.1.m1; Name=PIP1.1; organism=Fragaria x ananassa; type=mRNA; length=873bp; location=Sequence derived from: GQ390798:38..910+ (Fragaria x ananassa
atggaggccaaggaggaagatgtgagcttgggagccaacaagtacccgga
gaggcagcccatcggaatcgccgctcagagccaggacgacggcaaggact
acaaggagcctcccccggcaccgcttttcgagcccggcgagctgacgtca
tggtcgttttacagggccgggatcgccgagttcgtcgccacctttctgtt
tctctacatcaccgtcttgactgtgatgggagtcttgaagggtccgacta
agtgccaaaccgtaggtattcaagggatcgcttgggcttttggtggtatg
atcttcgccttggtttactgtaccgccggtatctcagggggtcacataaa
cccggctgtgactttcggccttttcttagccaggaagctgtccttgacta
gggcggtgttctacatcatcatgcagacccttggcgccatagctggagct
gccgtggtgaaagcttttgagaacaagaaccatttcttcgagttgaacgg
tggtggcgccaacagtgtagcccatggctacaccaagggtagtggtcttg
gtgctgaaattattggtacctttgtccttgtctacaccgtcttctccgcc
actgacgccaagcgtagcgccagagactcccatgttccgattttggcccc
gttgccaattgggttcgccgtgttcttggtgcacttagctaccatcccca
ttaccggaacaggtattaacccagctaggagtctcggtgcagccatcatc
tacaacaagaagcatgcctgggatgaccactggatcttctgggttggacc
attcattggtgcagcacttgcagctttgtaccacgtcgtcgtgatcaggg
ccattcctttcaagaataagtga

Coding sequence (CDS) from alignment at GQ390798:38..910+

>GQ390798.1-PIP1.1.m1 ID=GQ390798.1-PIP1.1.m1; Name=PIP1.1; organism=Fragaria x ananassa; type=CDS; length=873bp; location=Sequence derived from: GQ390798:38..910+ (Fragaria x ananassa
atggaggccaaggaggaagatgtgagcttgggagccaacaagtacccgga
gaggcagcccatcggaatcgccgctcagagccaggacgacggcaaggact
acaaggagcctcccccggcaccgcttttcgagcccggcgagctgacgtca
tggtcgttttacagggccgggatcgccgagttcgtcgccacctttctgtt
tctctacatcaccgtcttgactgtgatgggagtcttgaagggtccgacta
agtgccaaaccgtaggtattcaagggatcgcttgggcttttggtggtatg
atcttcgccttggtttactgtaccgccggtatctcagggggtcacataaa
cccggctgtgactttcggccttttcttagccaggaagctgtccttgacta
gggcggtgttctacatcatcatgcagacccttggcgccatagctggagct
gccgtggtgaaagcttttgagaacaagaaccatttcttcgagttgaacgg
tggtggcgccaacagtgtagcccatggctacaccaagggtagtggtcttg
gtgctgaaattattggtacctttgtccttgtctacaccgtcttctccgcc
actgacgccaagcgtagcgccagagactcccatgttccgattttggcccc
gttgccaattgggttcgccgtgttcttggtgcacttagctaccatcccca
ttaccggaacaggtattaacccagctaggagtctcggtgcagccatcatc
tacaacaagaagcatgcctgggatgaccactggatcttctgggttggacc
attcattggtgcagcacttgcagctttgtaccacgtcgtcgtgatcaggg
ccattcctttcaagaataagtga