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Transcript Overview
Name | IPT |
Unique Name | DQ792508.1-IPT.m1 |
Type | mRNA |
Organism | Malus hupehensis () |
Source | genbank |
Product | isopentenyltransferase |
Genbank Note | MhIPT |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
DQ792508.1-IPT.m1-cds1 | DQ792508.1-IPT.m1-cds1 | Malus hupehensis | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
IPT | DQ792508.1-IPT.p1 | Malus hupehensis | polypeptide |
Cross References
External references for this mRNA
Alignments
Feature Name | Type | Location | Analysis |
DQ792508 |
region |
DQ792508:201..1163+ |
NCBI Rosaceae gene and mRNA sequences |
Chr03 |
chromosome |
Chr03:35283549..35284511+ |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
chr3 |
chromosome |
chr3:31482982..31483944- |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
chr3 |
chromosome |
chr3:37001355..37002317+ |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >DQ792508.1-IPT.m1 ID=DQ792508.1-IPT.m1; Name=IPT; organism=Malus hupehensis; type=mRNA; length=963bp atgatgccaatgtgcaaacaaatacaaacattactacatgttccatctag tggccataatcataaaatggacgtgttcaatcctcaccggcagaaggaga aggtggtgatcgtaatgggagcaacagggaccggaaagtcaaggctctcc atcgacctagccacctgtttcccggcagaaatcataaactccgacaaaat gcaagtctacgaaggccttgacatagtcaccaacaaaataaccaaagaag agcaacgtggtgtaccgcaccatttgctagggatgctagatcctcatgaa gattttactgccagggatttttgtgacctaacctcaattgccattgaatc cattttaggccgtgatcggcttccaatcatcgttggaggttccaactctt acatcgaggcgttgatcgatgattatgactataaatttcggtccaagtat gactgttgctttttatgggtagatgtgtctacacccgctctgcactcttt tgtgtcaaaacgggtagaccacatggttcaaaacggaatggtggatgagg cgagagagtactttgatcccaatgcagattacacgaaagggattcgaaga gcaataggggtccctgaattcgataagtacttcaggtatgggccattttt ggaagaagaaactcgtgctcggttactacgacaagcagtggacgaaatta aggacaatacgtgcaaattggcatgtcggcaactggagaagattcataga cttagaaatatcaaagggtggaatctgcacccgttggatgccacggaggt gttccgaaagcgcggcgaagaggccgacgaggcctggaaaaagcttgtgt cggggacaagtgctatgatcgttggccagtttctttacaatatgacagct gaggttcctccacatcttggaagccttagggttcttgaagcacttgcagc tgcaactcactag back to topprotein sequence of IPT >DQ792508.1-IPT.p1 ID=DQ792508.1-IPT.p1; Name=IPT; organism=Malus hupehensis; type=polypeptide; length=320bp MMPMCKQIQTLLHVPSSGHNHKMDVFNPHRQKEKVVIVMGATGTGKSRLS IDLATCFPAEIINSDKMQVYEGLDIVTNKITKEEQRGVPHHLLGMLDPHE DFTARDFCDLTSIAIESILGRDRLPIIVGGSNSYIEALIDDYDYKFRSKY DCCFLWVDVSTPALHSFVSKRVDHMVQNGMVDEAREYFDPNADYTKGIRR AIGVPEFDKYFRYGPFLEEETRARLLRQAVDEIKDNTCKLACRQLEKIHR LRNIKGWNLHPLDATEVFRKRGEEADEAWKKLVSGTSAMIVGQFLYNMTA EVPPHLGSLRVLEALAAATH back to topmRNA from alignment at DQ792508:201..1163+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >DQ792508.1-IPT.m1 ID=DQ792508.1-IPT.m1; Name=IPT; organism=Malus hupehensis; type=mRNA; length=963bp; location=Sequence derived from: DQ792508:201..1163+ (Malus hupehensis atgatgccaatgtgcaaacaaatacaaacattactacatgttccatctag
tggccataatcataaaatggacgtgttcaatcctcaccggcagaaggaga
aggtggtgatcgtaatgggagcaacagggaccggaaagtcaaggctctcc
atcgacctagccacctgtttcccggcagaaatcataaactccgacaaaat
gcaagtctacgaaggccttgacatagtcaccaacaaaataaccaaagaag
agcaacgtggtgtaccgcaccatttgctagggatgctagatcctcatgaa
gattttactgccagggatttttgtgacctaacctcaattgccattgaatc
cattttaggccgtgatcggcttccaatcatcgttggaggttccaactctt
acatcgaggcgttgatcgatgattatgactataaatttcggtccaagtat
gactgttgctttttatgggtagatgtgtctacacccgctctgcactcttt
tgtgtcaaaacgggtagaccacatggttcaaaacggaatggtggatgagg
cgagagagtactttgatcccaatgcagattacacgaaagggattcgaaga
gcaataggggtccctgaattcgataagtacttcaggtatgggccattttt
ggaagaagaaactcgtgctcggttactacgacaagcagtggacgaaatta
aggacaatacgtgcaaattggcatgtcggcaactggagaagattcataga
cttagaaatatcaaagggtggaatctgcacccgttggatgccacggaggt
gttccgaaagcgcggcgaagaggccgacgaggcctggaaaaagcttgtgt
cggggacaagtgctatgatcgttggccagtttctttacaatatgacagct
gaggttcctccacatcttggaagccttagggttcttgaagcacttgcagc
tgcaactcactag back to topCoding sequence (CDS) from alignment at DQ792508:201..1163+ >DQ792508.1-IPT.m1 ID=DQ792508.1-IPT.m1; Name=IPT; organism=Malus hupehensis; type=CDS; length=963bp; location=Sequence derived from: DQ792508:201..1163+ (Malus hupehensis atgatgccaatgtgcaaacaaatacaaacattactacatgttccatctag tggccataatcataaaatggacgtgttcaatcctcaccggcagaaggaga aggtggtgatcgtaatgggagcaacagggaccggaaagtcaaggctctcc atcgacctagccacctgtttcccggcagaaatcataaactccgacaaaat gcaagtctacgaaggccttgacatagtcaccaacaaaataaccaaagaag agcaacgtggtgtaccgcaccatttgctagggatgctagatcctcatgaa gattttactgccagggatttttgtgacctaacctcaattgccattgaatc cattttaggccgtgatcggcttccaatcatcgttggaggttccaactctt acatcgaggcgttgatcgatgattatgactataaatttcggtccaagtat gactgttgctttttatgggtagatgtgtctacacccgctctgcactcttt tgtgtcaaaacgggtagaccacatggttcaaaacggaatggtggatgagg cgagagagtactttgatcccaatgcagattacacgaaagggattcgaaga gcaataggggtccctgaattcgataagtacttcaggtatgggccattttt ggaagaagaaactcgtgctcggttactacgacaagcagtggacgaaatta aggacaatacgtgcaaattggcatgtcggcaactggagaagattcataga cttagaaatatcaaagggtggaatctgcacccgttggatgccacggaggt gttccgaaagcgcggcgaagaggccgacgaggcctggaaaaagcttgtgt cggggacaagtgctatgatcgttggccagtttctttacaatatgacagct gaggttcctccacatcttggaagccttagggttcttgaagcacttgcagc tgcaactcactag back to top
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