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Transcript Overview
| Name | ZDS1 |
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| Unique Name | AF429983.1-ZDS1.m1 |
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| Type | mRNA |
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| Organism | Malus x domestica (Apple) |
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| Source | genbank |
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| Product | zeta-carotene desaturase ZDS1 |
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Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| AF429983.1-ZDS1.m1-cds1 | AF429983.1-ZDS1.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| ZDS1 | AF429983.1-ZDS1.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| AF429983 |
region |
AF429983:124..1830+ |
NCBI Rosaceae gene and mRNA sequences |
| Chr04 |
chromosome |
Chr04:30191591..30195489- |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
| chr4 |
chromosome |
chr4:21150094..21153993+ |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
| chr4 |
chromosome |
chr4:23514706..23518605- |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >AF429983.1-ZDS1.m1 ID=AF429983.1-ZDS1.m1; Name=ZDS1; organism=Malus x domestica; type=mRNA; length=1707bp
atggcttcttgggctcttttaccggcagctccagtaactggtcgctgtct
ggtgattcctgccaggacaaagaggtcctcctccttctgggttcgctctt
ctttggacactaatgtttctgacatgagggtaaacgggttgtttccacct
gaaccagagttctaccgcggtccgaagctgaaagtggccattatcggagc
tggactcgcgggcatgtcaaccgccgttgagcttttggatcaaggccatg
aggtggatatttatgaatcgaggcctttcattggcggaaaagtgggctct
tttgttgataaaaaaggaaaccacattgaaatgggactccatgttttctt
tggttgctacagtaatcttttccgattaatgaaaaaggtgggtgcagacg
aaaatcttcttgtcaaggatcatactcacacttttgtaaacaaagggggt
aacattggtgaacttgattttcggttcccaattggagcaccaatacatgg
gattcttgcatttttgtctacaaatcagattaagacttacgataaagcaa
gaaatgcagtggctcttgccttaagtccggttgtaaaggctcttgttaat
ccagatggagcattgcaggacgtacggaatttggatagtataagcttctc
tgattggttcttgtccaaaggtggcacgcgaatgagcatccagcggatgt
gggatcctgttgcatatgcacttgggtttattgactgtgataatattagc
gctcgttgtatgctcactatattcacattgtttgccactaagaccgaggc
ttcccttctacgcatgctcaagggttcgccagatgtttacttaagtggcc
ccatcagagattatatcattgccaaggggggcaggtttcatctcaggtgg
ggatgtagagaaatactatatgataaatcttctgatggcgaaacatatgt
tactggattttcgatgtctagggctactaacaagaaaattgtgacagccg
acgcttatgttgcagcgtgtgatgtgcctggaatcaagagactgcttcct
tctcagtggagggaatggaattttttcaataatgtttatgagctagttgg
agtccctgttgtcactgtgcaacttagatacgacggttgggtcacagagt
tacaagatctagaacggtcaaggcaattgaagcaagcttcgggattagat
aatctcctatatactcctgatgcagatttctcttgctttgccgacctagc
gcttacttctcctgaagattactacatcgagggacaaggttcactcctcc
aatgcgttttgacaccaggtgatccttacatgcctttaccaaacgaagaa
attatagcaagagtgacgaaacaggttttggctttattcccatcatccca
aggtttagaagtcacttggtcatcagttgtcaaaattgggcaatctctct
atcgggagggacctggcaaagatccgtttagacctgatcagaagacacct
gtgaagaattttttcctcgctggctcatacacaaaacaggactatatcga
cagcatggaaggagcaactttgtctggcaggcaagcctctgcatatatat
gtgatgccggggaagagttggtgggattgagaaagaagcttgcagcccaa
gattctggggaatacacaaaagctgttaatactactgatgagctgagtct
tgtctaa back to topprotein sequence of ZDS1 >AF429983.1-ZDS1.p1 ID=AF429983.1-ZDS1.p1; Name=ZDS1; organism=Malus x domestica; type=polypeptide; length=568bp
MASWALLPAAPVTGRCLVIPARTKRSSSFWVRSSLDTNVSDMRVNGLFPP
EPEFYRGPKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGS
FVDKKGNHIEMGLHVFFGCYSNLFRLMKKVGADENLLVKDHTHTFVNKGG
NIGELDFRFPIGAPIHGILAFLSTNQIKTYDKARNAVALALSPVVKALVN
PDGALQDVRNLDSISFSDWFLSKGGTRMSIQRMWDPVAYALGFIDCDNIS
ARCMLTIFTLFATKTEASLLRMLKGSPDVYLSGPIRDYIIAKGGRFHLRW
GCREILYDKSSDGETYVTGFSMSRATNKKIVTADAYVAACDVPGIKRLLP
SQWREWNFFNNVYELVGVPVVTVQLRYDGWVTELQDLERSRQLKQASGLD
NLLYTPDADFSCFADLALTSPEDYYIEGQGSLLQCVLTPGDPYMPLPNEE
IIARVTKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTP
VKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEELVGLRKKLAAQ
DSGEYTKAVNTTDELSLV back to topmRNA from alignment at AF429983:124..1830+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >AF429983.1-ZDS1.m1 ID=AF429983.1-ZDS1.m1; Name=ZDS1; organism=Malus x domestica; type=mRNA; length=1707bp; location=Sequence derived from: AF429983:124..1830+ (Malus x domestica
atggcttcttgggctcttttaccggcagctccagtaactggtcgctgtct
ggtgattcctgccaggacaaagaggtcctcctccttctgggttcgctctt
ctttggacactaatgtttctgacatgagggtaaacgggttgtttccacct
gaaccagagttctaccgcggtccgaagctgaaagtggccattatcggagc
tggactcgcgggcatgtcaaccgccgttgagcttttggatcaaggccatg
aggtggatatttatgaatcgaggcctttcattggcggaaaagtgggctct
tttgttgataaaaaaggaaaccacattgaaatgggactccatgttttctt
tggttgctacagtaatcttttccgattaatgaaaaaggtgggtgcagacg
aaaatcttcttgtcaaggatcatactcacacttttgtaaacaaagggggt
aacattggtgaacttgattttcggttcccaattggagcaccaatacatgg
gattcttgcatttttgtctacaaatcagattaagacttacgataaagcaa
gaaatgcagtggctcttgccttaagtccggttgtaaaggctcttgttaat
ccagatggagcattgcaggacgtacggaatttggatagtataagcttctc
tgattggttcttgtccaaaggtggcacgcgaatgagcatccagcggatgt
gggatcctgttgcatatgcacttgggtttattgactgtgataatattagc
gctcgttgtatgctcactatattcacattgtttgccactaagaccgaggc
ttcccttctacgcatgctcaagggttcgccagatgtttacttaagtggcc
ccatcagagattatatcattgccaaggggggcaggtttcatctcaggtgg
ggatgtagagaaatactatatgataaatcttctgatggcgaaacatatgt
tactggattttcgatgtctagggctactaacaagaaaattgtgacagccg
acgcttatgttgcagcgtgtgatgtgcctggaatcaagagactgcttcct
tctcagtggagggaatggaattttttcaataatgtttatgagctagttgg
agtccctgttgtcactgtgcaacttagatacgacggttgggtcacagagt
tacaagatctagaacggtcaaggcaattgaagcaagcttcgggattagat
aatctcctatatactcctgatgcagatttctcttgctttgccgacctagc
gcttacttctcctgaagattactacatcgagggacaaggttcactcctcc
aatgcgttttgacaccaggtgatccttacatgcctttaccaaacgaagaa
attatagcaagagtgacgaaacaggttttggctttattcccatcatccca
aggtttagaagtcacttggtcatcagttgtcaaaattgggcaatctctct
atcgggagggacctggcaaagatccgtttagacctgatcagaagacacct
gtgaagaattttttcctcgctggctcatacacaaaacaggactatatcga
cagcatggaaggagcaactttgtctggcaggcaagcctctgcatatatat
gtgatgccggggaagagttggtgggattgagaaagaagcttgcagcccaa
gattctggggaatacacaaaagctgttaatactactgatgagctgagtct
tgtctaa back to topCoding sequence (CDS) from alignment at AF429983:124..1830+ >AF429983.1-ZDS1.m1 ID=AF429983.1-ZDS1.m1; Name=ZDS1; organism=Malus x domestica; type=CDS; length=1707bp; location=Sequence derived from: AF429983:124..1830+ (Malus x domestica
atggcttcttgggctcttttaccggcagctccagtaactggtcgctgtct
ggtgattcctgccaggacaaagaggtcctcctccttctgggttcgctctt
ctttggacactaatgtttctgacatgagggtaaacgggttgtttccacct
gaaccagagttctaccgcggtccgaagctgaaagtggccattatcggagc
tggactcgcgggcatgtcaaccgccgttgagcttttggatcaaggccatg
aggtggatatttatgaatcgaggcctttcattggcggaaaagtgggctct
tttgttgataaaaaaggaaaccacattgaaatgggactccatgttttctt
tggttgctacagtaatcttttccgattaatgaaaaaggtgggtgcagacg
aaaatcttcttgtcaaggatcatactcacacttttgtaaacaaagggggt
aacattggtgaacttgattttcggttcccaattggagcaccaatacatgg
gattcttgcatttttgtctacaaatcagattaagacttacgataaagcaa
gaaatgcagtggctcttgccttaagtccggttgtaaaggctcttgttaat
ccagatggagcattgcaggacgtacggaatttggatagtataagcttctc
tgattggttcttgtccaaaggtggcacgcgaatgagcatccagcggatgt
gggatcctgttgcatatgcacttgggtttattgactgtgataatattagc
gctcgttgtatgctcactatattcacattgtttgccactaagaccgaggc
ttcccttctacgcatgctcaagggttcgccagatgtttacttaagtggcc
ccatcagagattatatcattgccaaggggggcaggtttcatctcaggtgg
ggatgtagagaaatactatatgataaatcttctgatggcgaaacatatgt
tactggattttcgatgtctagggctactaacaagaaaattgtgacagccg
acgcttatgttgcagcgtgtgatgtgcctggaatcaagagactgcttcct
tctcagtggagggaatggaattttttcaataatgtttatgagctagttgg
agtccctgttgtcactgtgcaacttagatacgacggttgggtcacagagt
tacaagatctagaacggtcaaggcaattgaagcaagcttcgggattagat
aatctcctatatactcctgatgcagatttctcttgctttgccgacctagc
gcttacttctcctgaagattactacatcgagggacaaggttcactcctcc
aatgcgttttgacaccaggtgatccttacatgcctttaccaaacgaagaa
attatagcaagagtgacgaaacaggttttggctttattcccatcatccca
aggtttagaagtcacttggtcatcagttgtcaaaattgggcaatctctct
atcgggagggacctggcaaagatccgtttagacctgatcagaagacacct
gtgaagaattttttcctcgctggctcatacacaaaacaggactatatcga
cagcatggaaggagcaactttgtctggcaggcaagcctctgcatatatat
gtgatgccggggaagagttggtgggattgagaaagaagcttgcagcccaa
gattctggggaatacacaaaagctgttaatactactgatgagctgagtct
tgtctaa back to top
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