PG1, AB231902.1-PG1.m1 (mRNA) Prunus persica

Transcript Overview


Name	PG1
Unique Name	AB231902.1-PG1.m1
Type	mRNA
Organism	Prunus persica (Peach)
Source	genbank
Product	polygalacturonase 1

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AB231902.1-PG1.m1-cds1	AB231902.1-PG1.m1-cds1	Prunus persica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PG1	AB231902.1-PG1.p1	Prunus persica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	226490390
nuccore	AB231902.1

Alignments

Feature Name	Type	Location	Analysis
AB231902	region	AB231902:37..1569+	NCBI Rosaceae gene and mRNA sequences
scaffold_3	supercontig	scaffold_3:20574939..20577358-	Prunus persica Whole Genome v1.0 Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AB231902:37..1569+
coding sequence from alignment at AB231902:37..1569+

mRNA sequence

>AB231902.1-PG1.m1 ID=AB231902.1-PG1.m1; Name=PG1; organism=Prunus persica; type=mRNA; length=1533bp
atgatgatcacatttaaactaagaagcctcacattctttgttttcattgc
cttttctatttggtgttcaagcttgttagaaccttgtgatgctagaaaag
gaggcaagcagtactggaggcaaaacaagggtgcctctgcctctgcattg
aggaaggaacaaaagggttatggcggcaatcaccagcgccaccaggcagg
ccctagggtgtctacgacaccgtcgaggggagacaattacatcacaccag
aagaaactgcagcaaaactgcaaaagaacagcggtgggaattccaacgtc
tttaatgtgttggactatggtgctaaaggcgatggaaaagcagatgatac
caaggcttttgaaacagcgtgggcagcagcttgcaaagtgccggcatcaa
ctataaatgttccatccgggtccgtgttcctcgtcaaaccaatctctttt
tctggccctaattgtgaagcaaatattgtatttcagttagatggcaaaat
catagctccaacaagctcaggagattggggttcaggtcttctacaatggc
tagaattcacgaagctaaaagggatttcaatcaaaggcaaaggagtaatt
gatgggcaaggctcagtttggtggagtgactcacccaccacatacaatat
tcctgcagatcaaacatatagcagttcacaggacacggtcatagaaagtg
acagtggaaaaatgccaagcaccaaaccaaccgctcttaggttctatgga
agtgacggcgtgagtgtcactggtataacacttcaaaacagccctcagac
ccacctcaagttcgacgcctgcacgaatgttcaggtttctgatataagta
tttcctcccctggtgacagccccaacacagatggaatccacctccaaaac
tctcaggatgttgtcatttttggcaccagtattgcttgtggggatgactg
tatatccatacaaactggatgctcaaacatatacgtacacaacgtgaatt
gtggacccggacatggagtcagcatcgtagggctagggaaggataacact
agagcttgtgtatcgaacgtcacagtccgagatgtaaaaatgcacaatac
actcactggcgtcagaataaagacctggcagggaggatcagggtcagtcc
aaaacatcatgttttcaaacattcaagtatcagaagttgcaaccccaatc
atgattgaccaattctactgtgacaagagcaaatgccaaaatgagacatc
agccgtggcagtttcgggtgtaaactatgtaaacatacaaggaacctata
cgacgaaacctgtacattttgcatgcagtgacagcttaccgtgtactggt
gtgtctctggacaccatacagctgaaatcagttgatgaaggcaagcaatt
gtatggccctttctgttgggaggcgtacggagagctcaaaacaagcacag
tccctgaaattgactgcttgaagaaggggaagccatattcaagcagcaca
ggagctcagtctgaaagtagtgattcttgctaa

protein sequence of PG1

>AB231902.1-PG1.p1 ID=AB231902.1-PG1.p1; Name=PG1; organism=Prunus persica; type=polypeptide; length=510bp
MMITFKLRSLTFFVFIAFSIWCSSLLEPCDARKGGKQYWRQNKGASASAL
RKEQKGYGGNHQRHQAGPRVSTTPSRGDNYITPEETAAKLQKNSGGNSNV
FNVLDYGAKGDGKADDTKAFETAWAAACKVPASTINVPSGSVFLVKPISF
SGPNCEANIVFQLDGKIIAPTSSGDWGSGLLQWLEFTKLKGISIKGKGVI
DGQGSVWWSDSPTTYNIPADQTYSSSQDTVIESDSGKMPSTKPTALRFYG
SDGVSVTGITLQNSPQTHLKFDACTNVQVSDISISSPGDSPNTDGIHLQN
SQDVVIFGTSIACGDDCISIQTGCSNIYVHNVNCGPGHGVSIVGLGKDNT
RACVSNVTVRDVKMHNTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPI
MIDQFYCDKSKCQNETSAVAVSGVNYVNIQGTYTTKPVHFACSDSLPCTG
VSLDTIQLKSVDEGKQLYGPFCWEAYGELKTSTVPEIDCLKKGKPYSSST
GAQSESSDSC

mRNA from alignment at AB231902:37..1569+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AB231902.1-PG1.m1 ID=AB231902.1-PG1.m1; Name=PG1; organism=Prunus persica; type=mRNA; length=1533bp; location=Sequence derived from: AB231902:37..1569+ (Prunus persica
atgatgatcacatttaaactaagaagcctcacattctttgttttcattgc
cttttctatttggtgttcaagcttgttagaaccttgtgatgctagaaaag
gaggcaagcagtactggaggcaaaacaagggtgcctctgcctctgcattg
aggaaggaacaaaagggttatggcggcaatcaccagcgccaccaggcagg
ccctagggtgtctacgacaccgtcgaggggagacaattacatcacaccag
aagaaactgcagcaaaactgcaaaagaacagcggtgggaattccaacgtc
tttaatgtgttggactatggtgctaaaggcgatggaaaagcagatgatac
caaggcttttgaaacagcgtgggcagcagcttgcaaagtgccggcatcaa
ctataaatgttccatccgggtccgtgttcctcgtcaaaccaatctctttt
tctggccctaattgtgaagcaaatattgtatttcagttagatggcaaaat
catagctccaacaagctcaggagattggggttcaggtcttctacaatggc
tagaattcacgaagctaaaagggatttcaatcaaaggcaaaggagtaatt
gatgggcaaggctcagtttggtggagtgactcacccaccacatacaatat
tcctgcagatcaaacatatagcagttcacaggacacggtcatagaaagtg
acagtggaaaaatgccaagcaccaaaccaaccgctcttaggttctatgga
agtgacggcgtgagtgtcactggtataacacttcaaaacagccctcagac
ccacctcaagttcgacgcctgcacgaatgttcaggtttctgatataagta
tttcctcccctggtgacagccccaacacagatggaatccacctccaaaac
tctcaggatgttgtcatttttggcaccagtattgcttgtggggatgactg
tatatccatacaaactggatgctcaaacatatacgtacacaacgtgaatt
gtggacccggacatggagtcagcatcgtagggctagggaaggataacact
agagcttgtgtatcgaacgtcacagtccgagatgtaaaaatgcacaatac
actcactggcgtcagaataaagacctggcagggaggatcagggtcagtcc
aaaacatcatgttttcaaacattcaagtatcagaagttgcaaccccaatc
atgattgaccaattctactgtgacaagagcaaatgccaaaatgagacatc
agccgtggcagtttcgggtgtaaactatgtaaacatacaaggaacctata
cgacgaaacctgtacattttgcatgcagtgacagcttaccgtgtactggt
gtgtctctggacaccatacagctgaaatcagttgatgaaggcaagcaatt
gtatggccctttctgttgggaggcgtacggagagctcaaaacaagcacag
tccctgaaattgactgcttgaagaaggggaagccatattcaagcagcaca
ggagctcagtctgaaagtagtgattcttgctaa

Coding sequence (CDS) from alignment at AB231902:37..1569+

>AB231902.1-PG1.m1 ID=AB231902.1-PG1.m1; Name=PG1; organism=Prunus persica; type=CDS; length=1533bp; location=Sequence derived from: AB231902:37..1569+ (Prunus persica
atgatgatcacatttaaactaagaagcctcacattctttgttttcattgc
cttttctatttggtgttcaagcttgttagaaccttgtgatgctagaaaag
gaggcaagcagtactggaggcaaaacaagggtgcctctgcctctgcattg
aggaaggaacaaaagggttatggcggcaatcaccagcgccaccaggcagg
ccctagggtgtctacgacaccgtcgaggggagacaattacatcacaccag
aagaaactgcagcaaaactgcaaaagaacagcggtgggaattccaacgtc
tttaatgtgttggactatggtgctaaaggcgatggaaaagcagatgatac
caaggcttttgaaacagcgtgggcagcagcttgcaaagtgccggcatcaa
ctataaatgttccatccgggtccgtgttcctcgtcaaaccaatctctttt
tctggccctaattgtgaagcaaatattgtatttcagttagatggcaaaat
catagctccaacaagctcaggagattggggttcaggtcttctacaatggc
tagaattcacgaagctaaaagggatttcaatcaaaggcaaaggagtaatt
gatgggcaaggctcagtttggtggagtgactcacccaccacatacaatat
tcctgcagatcaaacatatagcagttcacaggacacggtcatagaaagtg
acagtggaaaaatgccaagcaccaaaccaaccgctcttaggttctatgga
agtgacggcgtgagtgtcactggtataacacttcaaaacagccctcagac
ccacctcaagttcgacgcctgcacgaatgttcaggtttctgatataagta
tttcctcccctggtgacagccccaacacagatggaatccacctccaaaac
tctcaggatgttgtcatttttggcaccagtattgcttgtggggatgactg
tatatccatacaaactggatgctcaaacatatacgtacacaacgtgaatt
gtggacccggacatggagtcagcatcgtagggctagggaaggataacact
agagcttgtgtatcgaacgtcacagtccgagatgtaaaaatgcacaatac
actcactggcgtcagaataaagacctggcagggaggatcagggtcagtcc
aaaacatcatgttttcaaacattcaagtatcagaagttgcaaccccaatc
atgattgaccaattctactgtgacaagagcaaatgccaaaatgagacatc
agccgtggcagtttcgggtgtaaactatgtaaacatacaaggaacctata
cgacgaaacctgtacattttgcatgcagtgacagcttaccgtgtactggt
gtgtctctggacaccatacagctgaaatcagttgatgaaggcaagcaatt
gtatggccctttctgttgggaggcgtacggagagctcaaaacaagcacag
tccctgaaattgactgcttgaagaaggggaagccatattcaagcagcaca
ggagctcagtctgaaagtagtgattcttgctaa