XTH4, AB428381.1-XTH4.m1 (mRNA) Rosa hybrid cultivar

Transcript Overview
NameXTH4
Unique NameAB428381.1-XTH4.m1
TypemRNA
OrganismRosa hybrid cultivar ()
Sourcegenbank
Productxyloglucan endotransglucosylase/hydrolase
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AB428381regionAB428381:84..992 +NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AB428381.1-XTH4.m1-cds1AB428381.1-XTH4.m1-cds1Rosa hybrid cultivarCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
XTH4AB428381.1-XTH4.p1Rosa hybrid cultivarpolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI226001045
nuccoreAB428381.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AB428381.1-XTH4.m1 ID=AB428381.1-XTH4.m1; Name=XTH4; organism=Rosa hybrid cultivar; type=mRNA; length=909bp
atggctgctgctacttcagcctcgaaaatcatgtctctgtctctcagtgt
gttcttgggtctctcattgttcctgggtctggtcagctcggccaaattcg
accagcttttccagccctactgggcctccgaccatttcacatacgaaggc
gagcttcttcatatgaagctcgacaatttttccggagctgggttttcatc
caagaacaagtacatgtttggcaaagtgaccgtacagattaagctcatag
agggtgactctgctggaactgtcactgctttctatatgtcatcggacggt
ccactgcacaacgagtttgatttcgagttcctgggcaacaccacagggga
gccttactctgttcagaccaacctctatatcaatggcgtcggcaatagag
agcaaaggctcgacctttggtttgacccaaccacggacttccattcctac
tccattttctggaaccagcgccaagtagtgtttctagtggatgagacccc
aattagggtacacacaaacatggaaagcaagggtttgcccttccccaagg
accaggctatgggggtatacagctcaatctggaatgccgatgactgggcc
acacagggcgggcgggtcaagaccgattggtcccatggaccctttgttgc
atcttataagggctttgacatcaatgcctgtgagtgcccggtctccgtgg
ccggagccgataacgccaagaagtgcaccagcagcgcagacaagaagtac
tggtgggatgagcctgtgctgtccgagctgaacgtccaccagaaccacca
gctggtgtgggttaagaaccaccacatggtctatgactactgcactgata
ctgctaggttcccggtcactccagttgagtgtgtgcaccacggtcaccac
cgccactag
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protein sequence of XTH4

>AB428381.1-XTH4.p1 ID=AB428381.1-XTH4.p1; Name=XTH4; organism=Rosa hybrid cultivar; type=polypeptide; length=302bp
MAAATSASKIMSLSLSVFLGLSLFLGLVSSAKFDQLFQPYWASDHFTYEG
ELLHMKLDNFSGAGFSSKNKYMFGKVTVQIKLIEGDSAGTVTAFYMSSDG
PLHNEFDFEFLGNTTGEPYSVQTNLYINGVGNREQRLDLWFDPTTDFHSY
SIFWNQRQVVFLVDETPIRVHTNMESKGLPFPKDQAMGVYSSIWNADDWA
TQGGRVKTDWSHGPFVASYKGFDINACECPVSVAGADNAKKCTSSADKKY
WWDEPVLSELNVHQNHQLVWVKNHHMVYDYCTDTARFPVTPVECVHHGHH
RH
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mRNA from alignment at AB428381:84..992+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AB428381.1-XTH4.m1 ID=AB428381.1-XTH4.m1; Name=XTH4; organism=Rosa hybrid cultivar; type=mRNA; length=909bp; location=Sequence derived from: AB428381:84..992+ (Rosa hybrid cultivar
atggctgctgctacttcagcctcgaaaatcatgtctctgtctctcagtgt
gttcttgggtctctcattgttcctgggtctggtcagctcggccaaattcg
accagcttttccagccctactgggcctccgaccatttcacatacgaaggc
gagcttcttcatatgaagctcgacaatttttccggagctgggttttcatc
caagaacaagtacatgtttggcaaagtgaccgtacagattaagctcatag
agggtgactctgctggaactgtcactgctttctatatgtcatcggacggt
ccactgcacaacgagtttgatttcgagttcctgggcaacaccacagggga
gccttactctgttcagaccaacctctatatcaatggcgtcggcaatagag
agcaaaggctcgacctttggtttgacccaaccacggacttccattcctac
tccattttctggaaccagcgccaagtagtgtttctagtggatgagacccc
aattagggtacacacaaacatggaaagcaagggtttgcccttccccaagg
accaggctatgggggtatacagctcaatctggaatgccgatgactgggcc
acacagggcgggcgggtcaagaccgattggtcccatggaccctttgttgc
atcttataagggctttgacatcaatgcctgtgagtgcccggtctccgtgg
ccggagccgataacgccaagaagtgcaccagcagcgcagacaagaagtac
tggtgggatgagcctgtgctgtccgagctgaacgtccaccagaaccacca
gctggtgtgggttaagaaccaccacatggtctatgactactgcactgata
ctgctaggttcccggtcactccagttgagtgtgtgcaccacggtcaccac
cgccactag
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Coding sequence (CDS) from alignment at AB428381:84..992+

>AB428381.1-XTH4.m1 ID=AB428381.1-XTH4.m1; Name=XTH4; organism=Rosa hybrid cultivar; type=CDS; length=909bp; location=Sequence derived from: AB428381:84..992+ (Rosa hybrid cultivar
atggctgctgctacttcagcctcgaaaatcatgtctctgtctctcagtgt
gttcttgggtctctcattgttcctgggtctggtcagctcggccaaattcg
accagcttttccagccctactgggcctccgaccatttcacatacgaaggc
gagcttcttcatatgaagctcgacaatttttccggagctgggttttcatc
caagaacaagtacatgtttggcaaagtgaccgtacagattaagctcatag
agggtgactctgctggaactgtcactgctttctatatgtcatcggacggt
ccactgcacaacgagtttgatttcgagttcctgggcaacaccacagggga
gccttactctgttcagaccaacctctatatcaatggcgtcggcaatagag
agcaaaggctcgacctttggtttgacccaaccacggacttccattcctac
tccattttctggaaccagcgccaagtagtgtttctagtggatgagacccc
aattagggtacacacaaacatggaaagcaagggtttgcccttccccaagg
accaggctatgggggtatacagctcaatctggaatgccgatgactgggcc
acacagggcgggcgggtcaagaccgattggtcccatggaccctttgttgc
atcttataagggctttgacatcaatgcctgtgagtgcccggtctccgtgg
ccggagccgataacgccaagaagtgcaccagcagcgcagacaagaagtac
tggtgggatgagcctgtgctgtccgagctgaacgtccaccagaaccacca
gctggtgtgggttaagaaccaccacatggtctatgactactgcactgata
ctgctaggttcccggtcactccagttgagtgtgtgcaccacggtcaccac
cgccactag
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