CBF1, EU117214.2-CBF1.m1 (mRNA) Fragaria x ananassa

Transcript Overview
NameCBF1
Unique NameEU117214.2-CBF1.m1
TypemRNA
OrganismFragaria x ananassa (Strawberry)
Sourcegenbank
ProductCRT/DRE-binding factor 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBF1EU117214.2-CBF1Fragaria x ananassagene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU117214.2-CBF1.m1-5utr1EU117214.2-CBF1.m1-5utr1Fragaria x ananassafive_prime_UTR


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU117214.2-CBF1.m1-3utr1EU117214.2-CBF1.m1-3utr1Fragaria x ananassathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU117214.2-CBF1.m1-cds1EU117214.2-CBF1.m1-cds1Fragaria x ananassaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBF1EU117214.2-CBF1.p1Fragaria x ananassapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI225196199
nuccoreEU117214.2
Alignments
Feature NameTypeLocationAnalysis
EU117214 region EU117214:331..1124+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>EU117214.2-CBF1.m1 ID=EU117214.2-CBF1.m1; Name=CBF1; organism=Fragaria x ananassa; type=mRNA; length=636bp
atgcttgaatcgtcgtcgcatagcgaaaacaattctgggggtgttggtcg
aatgactttgtctgacgaagaggtcatgctggcgtcgagccggccgaaga
ggccggctgggaggaaggagtttcgggggactcggcatccggtgtatcgg
ggagtgaggaggagggattcgggcaagtgggtttgtgaactgagggagcc
gaacaagaagtcgaggatttggctgggcacatttcccaccgccgaaatgg
cagcgcgggctcatgacgtggcggcgatcgctttgagggggaggttagct
tgtttgaacttcgctgactcttcttggcggctgccgttgccggcttccac
tgaccccaaggatattcagaaggccgctgcggaggcggccgaggcgttcc
ggcccgagaaggatttgaggagggtggatgacaagatggacgagaaagaa
gtggcggagaggacgacaatgtcggatggtgtgatttttatggacgaaga
agcggtttttgggatgcccggattgttgacgaacagggccgaaggcatgc
tactccctccaccccattacaaggggtatgggggtgatgacatgggcacc
gatgctgatgtcagcttgtggagtttctccatttaa
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protein sequence of CBF1

>EU117214.2-CBF1.p1 ID=EU117214.2-CBF1.p1; Name=CBF1; organism=Fragaria x ananassa; type=polypeptide; length=211bp
MLESSSHSENNSGGVGRMTLSDEEVMLASSRPKRPAGRKEFRGTRHPVYR
GVRRRDSGKWVCELREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRLA
CLNFADSSWRLPLPASTDPKDIQKAAAEAAEAFRPEKDLRRVDDKMDEKE
VAERTTMSDGVIFMDEEAVFGMPGLLTNRAEGMLLPPPHYKGYGGDDMGT
DADVSLWSFSI
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mRNA from alignment at EU117214:331..1124+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EU117214.2-CBF1.m1 ID=EU117214.2-CBF1.m1; Name=CBF1; organism=Fragaria x ananassa; type=mRNA; length=794bp; location=Sequence derived from: EU117214:331..1124+ (Fragaria x ananassa
gccattctccctcacttccagtcttaacttttatctaatagatttcacgc
acacacggagttaactgacagttaatcacttcaggcactgcacttattat
tgtacgtggattgcatgcttgaatcgtcgtcgcatagcgaaaacaattct
gggggtgttggtcgaatgactttgtctgacgaagaggtcatgctggcgtc
gagccggccgaagaggccggctgggaggaaggagtttcgggggactcggc
atccggtgtatcggggagtgaggaggagggattcgggcaagtgggtttgt
gaactgagggagccgaacaagaagtcgaggatttggctgggcacatttcc
caccgccgaaatggcagcgcgggctcatgacgtggcggcgatcgctttga
gggggaggttagcttgtttgaacttcgctgactcttcttggcggctgccg
ttgccggcttccactgaccccaaggatattcagaaggccgctgcggaggc
ggccgaggcgttccggcccgagaaggatttgaggagggtggatgacaaga
tggacgagaaagaagtggcggagaggacgacaatgtcggatggtgtgatt
tttatggacgaagaagcggtttttgggatgcccggattgttgacgaacag
ggccgaaggcatgctactccctccaccccattacaaggggtatgggggtg
atgacatgggcaccgatgctgatgtcagcttgtggagtttctccatttaa
ttaagttagtttagatgttatagtgaagcagtaatcaggcggtc
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Coding sequence (CDS) from alignment at EU117214:331..1124+

>EU117214.2-CBF1.m1 ID=EU117214.2-CBF1.m1; Name=CBF1; organism=Fragaria x ananassa; type=CDS; length=636bp; location=Sequence derived from: EU117214:331..1124+ (Fragaria x ananassa
atgcttgaatcgtcgtcgcatagcgaaaacaattctgggggtgttggtcg
aatgactttgtctgacgaagaggtcatgctggcgtcgagccggccgaaga
ggccggctgggaggaaggagtttcgggggactcggcatccggtgtatcgg
ggagtgaggaggagggattcgggcaagtgggtttgtgaactgagggagcc
gaacaagaagtcgaggatttggctgggcacatttcccaccgccgaaatgg
cagcgcgggctcatgacgtggcggcgatcgctttgagggggaggttagct
tgtttgaacttcgctgactcttcttggcggctgccgttgccggcttccac
tgaccccaaggatattcagaaggccgctgcggaggcggccgaggcgttcc
ggcccgagaaggatttgaggagggtggatgacaagatggacgagaaagaa
gtggcggagaggacgacaatgtcggatggtgtgatttttatggacgaaga
agcggtttttgggatgcccggattgttgacgaacagggccgaaggcatgc
tactccctccaccccattacaaggggtatgggggtgatgacatgggcacc
gatgctgatgtcagcttgtggagtttctccatttaa
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