S-RNase, AB479469.1-S-RNase.m1 (mRNA) Prunus subhirtella

Transcript Overview


Name	S-RNase
Unique Name	AB479469.1-S-RNase.m1
Type	mRNA
Organism	Prunus subhirtella ()
Source	genbank
Product	S-RNase

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
S-RNase	AB479469.1-S-RNase	Prunus subhirtella	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
AB479469.1-S-RNase.m1-cds1	AB479469.1-S-RNase.m1-cds1	Prunus subhirtella	CDS
AB479469.1-S-RNase.m1-cds2	AB479469.1-S-RNase.m1-cds2	Prunus subhirtella	CDS
AB479469.1-S-RNase.m1-cds3	AB479469.1-S-RNase.m1-cds3	Prunus subhirtella	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
S-RNase	AB479469.1-S-RNase.p1	Prunus subhirtella	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	222533801
nuccore	AB479469.1

Alignments

Feature Name	Type	Location	Analysis
AB479469	region	AB479469:46..3271+	NCBI Rosaceae gene and mRNA sequences

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at AB479469:46..3271+
coding sequence from alignment at AB479469:46..3271+

mRNA sequence

>AB479469.1-S-RNase.m1 ID=AB479469.1-S-RNase.m1; Name=S-RNase; organism=Prunus subhirtella; type=mRNA; length=720bp
atggcgatgtcgaaatcgtcactcgctttccttgttcttgcttttgcttt
cttcttgtgtttcattatgagcactggatcttatgactattttcaatttg
tgcaacaatggccaccgaccaactgcaaagttcgcatcaagcaaccttgc
tccaacccccggccattgcaatatttcaccatccatggcctatggccaag
caattattcaaacccaaggatgcccagtaattgcactgggtcgcaatttg
agtggcggaaattgtatcctcatatgcgatccaaactgaagatatcttgg
ccagacgtggaaagtggcaatgatacaaaattttgggaaggcgaatggaa
caaacatggtacatgttccgtagagaaactaaaccaaatgcaatacttcg
agcgatcccacgcaatgtggagatcgtacaatattacagagatccttaaa
aacgcttcaatcctaccaagtgcgacacaaacatggacctactccgacat
agtatcacccattcaaaaagctactaaaagaacacccctccttcgttgca
aatctcttccacagcctaagagccaggcgaagtctcagcctaagagacag
gcgagatctcaattgttacatgaagtggtactttgttttgattataatgc
gctagtacatattgactgtaatcgaacagcaggatgctggaataatgttg
acatcaagtttcccccataa

protein sequence of S-RNase

>AB479469.1-S-RNase.p1 ID=AB479469.1-S-RNase.p1; Name=S-RNase; organism=Prunus subhirtella; type=polypeptide; length=239bp
MAMSKSSLAFLVLAFAFFLCFIMSTGSYDYFQFVQQWPPTNCKVRIKQPC
SNPRPLQYFTIHGLWPSNYSNPRMPSNCTGSQFEWRKLYPHMRSKLKISW
PDVESGNDTKFWEGEWNKHGTCSVEKLNQMQYFERSHAMWRSYNITEILK
NASILPSATQTWTYSDIVSPIQKATKRTPLLRCKSLPQPKSQAKSQPKRQ
ARSQLLHEVVLCFDYNALVHIDCNRTAGCWNNVDIKFPP

mRNA from alignment at AB479469:46..3271+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>AB479469.1-S-RNase.m1 ID=AB479469.1-S-RNase.m1; Name=S-RNase; organism=Prunus subhirtella; type=mRNA; length=3226bp; location=Sequence derived from: AB479469:46..3271+ (Prunus subhirtella
atggcgatgtcgaaatcgtcactcgctttccttgttcttgcttttgcttt
cttcttgtgtttcattatgagcactggtgagttgcattacaatatttttc
tcttttatcctatatgcatgcaattcgaattgcaattttctacttctatt
ttatgtttagaaaaatattgtgcgtgttcgatgatatatcaggaacggag
gacttgatttctctggatgagaaactatttgggaattactttcgatagtt
gttgcaaattgtgcagtgttcatcattggaaattatgttctctatacatc
aaatacttaagataccgttaaaccttctcacaacaattttggcaggatct
tatgactattttcaatttgtgcaacaatggccaccgaccaactgcaaagt
tcgcatcaagcaaccttgctccaacccccggccattgcaatatttcacca
tccatggcctatggccaagcaattattcaaacccaaggatgcccagtaat
tgcactgggtcgcaatttgagtggcggaaattggtatgcgttcctttttt
cacttaattttaacgtttagttcttagataattattgtcatatgaagata
attttttttttttttcaataaaccttgggtgttagatacaattttgaggt
tggttctcacactaagcaaattattttgaatatatatagtccccttctat
tgagggatcctcaaataaaattatttgagggataccttttaggattccct
acaaaaaaaaaaatttcaacaatccaaaccatctatttttaagtctaaat
tcatagattatccttgcaaaaaatttgacaaattggaaaccgtttcgaca
tccaattatgtcatacaaaatcaatgaacacagtgcttcaagaaagtact
aaaatttcaataactcaattgagtagtcaaataatatcatattcaagtga
tttttgtagagatgatctttgaacaattatctaaaaaatagacggttttg
attatacaaagagtttccgttgatggatccatcaaataagtttatttgag
ggacaactttgtagggttcactctgcattgtatttcactaatccaaaact
tctagtttgtcttgacaaaggaaaaaatcatatattttgtagatatttat
tcaaatatcatatctatagaagaaaaaaaatactttaatccgatatcatt
tgagctctcaattaaattattgaaatttatgtactttcttgaagtaccat
attcattgattttgttggtctcaattagatgccttaatgattttcaattt
gcatgattttttgtaaggatgatctgtgaatgaaggtgtgaaaaatagat
gatttggattgttgaaatttttttcataggggaccctaaaggatgtctct
caaataaaattattcaagagacgccctttagggtaccatacaaatttttt
tttaacgatccaagccatctatttttcaagtcttcattcatagatcatcc
ttgaaaaaatcatacaaatagaaagaaagaaaccatattcattaaatgag
agtgatatagtaaattaacaatttttttattaaacaaataaaataaaaaa
acaaaatgattacatgtgatatcaagacatgtcacatatgatatggcaac
ccatgtcatctactatctttaatatatatatatttataagagatattggg
gaagtggggatcaaacctaagacctcatgtgcatgagtaaatatactctt
aaccacaagccttttgcatcatctcataatttttttttaatacaaacgat
aatttaaataaattacactacgaacagggaattcgaacttaggggcgaga
ggtgcggtctcactcaactagccaaacccactttttcctctcatccttct
ttttaattacacattttgtcgccaaaaataaaagggaaaagaaaatcatt
gagcacataaaaatgattcatcaatatagattcaaggtttatatactcat
cgcccatcccatccccagaattcaaaagtaactccctccattcaagactt
caagagctcccaccgctcaccacatcagcctccactgccacgacaatgct
gctgatgccgagcgtttttgtttccattcgtctttatattctatttggat
cattcgcaatcttgaaagttgactctggatctcttctaatgactctggga
atgggaagtgtttcaatatataatgcattcagtcattgatttgtttcaag
atttaaaggcgattagtgagtacacaagggaaattctgacttagcgggga
aacacagtcttgtttaatgacctatatatcctcctaggttatgcgatctt
ttttcggttacattgggaggaaggaaaccccttgaggtttcgaacctgga
tatcaagatttgaataatttaacactatacaacaagaaaagtgcttaaca
gaattatttttttccgtgatggtgtacggcggtgcgatgaaaagttttag
tctttcaacggagggagtgaatgtttaatttttgggggatttattcccga
acattagactagcctctcgcacaaaggccgagagggcttttgttctaccc
cgaacattagactcctctcgcacataggccgagagtactaaactaaaaat
tgaccctaatagtcagaatcaaaattagaattcaatttcattgtcaggtt
taatgaggaaaaacaaaaatatatacctacgttttacttttttttctcac
aatatgcttggatgtctcagtatcctcatatgcgatccaaactgaagata
tcttggccagacgtggaaagtggcaatgatacaaaattttgggaaggcga
atggaacaaacatggtacatgttccgtagagaaactaaaccaaatgcaat
acttcgagcgatcccacgcaatgtggagatcgtacaatattacagagatc
cttaaaaacgcttcaatcctaccaagtgcgacacaaacatggacctactc
cgacatagtatcacccattcaaaaagctactaaaagaacacccctccttc
gttgcaaatctcttccacagcctaagagccaggcgaagtctcagcctaag
agacaggcgagatctcaattgttacatgaagtggtactttgttttgatta
taatgcgctagtacatattgactgtaatcgaacagcaggatgctggaata
atgttgacatcaagtttcccccataa

Coding sequence (CDS) from alignment at AB479469:46..3271+

>AB479469.1-S-RNase.m1 ID=AB479469.1-S-RNase.m1; Name=S-RNase; organism=Prunus subhirtella; type=CDS; length=720bp; location=Sequence derived from: AB479469:46..3271+ (Prunus subhirtella
atggcgatgtcgaaatcgtcactcgctttccttgttcttgcttttgcttt
cttcttgtgtttcattatgagcactggatcttatgactattttcaatttg
tgcaacaatggccaccgaccaactgcaaagttcgcatcaagcaaccttgc
tccaacccccggccattgcaatatttcaccatccatggcctatggccaag
caattattcaaacccaaggatgcccagtaattgcactgggtcgcaatttg
agtggcggaaattgtatcctcatatgcgatccaaactgaagatatcttgg
ccagacgtggaaagtggcaatgatacaaaattttgggaaggcgaatggaa
caaacatggtacatgttccgtagagaaactaaaccaaatgcaatacttcg
agcgatcccacgcaatgtggagatcgtacaatattacagagatccttaaa
aacgcttcaatcctaccaagtgcgacacaaacatggacctactccgacat
agtatcacccattcaaaaagctactaaaagaacacccctccttcgttgca
aatctcttccacagcctaagagccaggcgaagtctcagcctaagagacag
gcgagatctcaattgttacatgaagtggtactttgttttgattataatgc
gctagtacatattgactgtaatcgaacagcaggatgctggaataatgttg
acatcaagtttcccccataa