OMT3, DQ886020.1-OMT3.m1 (mRNA) Malus x domestica

Transcript Overview
NameOMT3
Unique NameDQ886020.1-OMT3.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
Productcaffeic acid O-methyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OMT3DQ886020.1-OMT3Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
DQ886020.1-OMT3.m1-cds1DQ886020.1-OMT3.m1-cds1Malus x domesticaCDS
DQ886020.1-OMT3.m1-cds2DQ886020.1-OMT3.m1-cds2Malus x domesticaCDS
DQ886020.1-OMT3.m1-cds3DQ886020.1-OMT3.m1-cds3Malus x domesticaCDS
DQ886020.1-OMT3.m1-cds4DQ886020.1-OMT3.m1-cds4Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
OMT3DQ886020.1-OMT3.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI114199048
nuccoreDQ886020.1
Alignments
Feature NameTypeLocationAnalysis
DQ886020 region DQ886020:1876..4670+ NCBI Rosaceae gene and mRNA sequences
Chr01 chromosome Chr01:31117187..31127715+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:31859569..31862400- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr1 chromosome chr1:28728159..28730980- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr1 chromosome chr1:34668687..34680752+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
chr1 chromosome chr1:35423018..35425839- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>DQ886020.1-OMT3.m1 ID=DQ886020.1-OMT3.m1; Name=OMT3; organism=Malus x domestica; type=mRNA; length=1098bp
atgggttcgaccccagagactcagatgactccaacccaagtctccgatga
agaagccaacctcttcgccatgcagctagccagcgcctccgtcctcccca
tggtgctcaaggcagccatcgagctcgacctcctcgagatcatggcaaaa
gccgggcctggcgcttttgtttctccggctgacttatcttcgcagctgcc
gaccaagaaccctgacgcccccgtcatgctggaccgcatgctgcgcgtcc
tggccagctactctatcctcacttactccctccgcacacttcccgacggc
aaagtcgagcggctgtacggcctcggccccgtctgcaagttcttgacaaa
gagcgaggatggtgcttccattggttctctctgcctcatgaatcaggaca
aggtccttatggagagctggtacaacttgaaagatgcagtccttgaagga
ggtattccattcaacaaggcctacggaatgactgcttttgagtaccatgg
cactgaccccagattcaacaaggtcttcaacaagggaatggctgaccact
ctaccattaccatgaagaaacttcttgagaactacaatggctttgagggc
ctcacatccatcgttgatgttggtggtggcaccggcgctgtccttaacat
gatcgtctctaaatacccttcgattaagggcattaacttcgacttgcctc
atgtcatcgaagatgctccccaatatcctggtgtggagcatgttggagga
gacatgtttgtaagtgttccaaagggagatgcaattttcatgaagtggat
atgccacgactggagtgacgagcattgcttgaaatttttgaagaactgcc
atgctgcgctcccagacaatgggaaggtaattgttgctgagtgcattctt
ccggtagctccggacactagccttgccaccaagggagttgtccatatcga
cgcgatcatgttagctcacaaccccggcggaaaagagaggacggagaagg
agttcgaggccttggctaagggatctggattccaaggctttcgagtcgtg
tgctctgctttcaacacctatgccattgagtttcttaagaagaattga
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protein sequence of OMT3

>DQ886020.1-OMT3.p1 ID=DQ886020.1-OMT3.p1; Name=OMT3; organism=Malus x domestica; type=polypeptide; length=365bp
MGSTPETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAK
AGPGAFVSPADLSSQLPTKNPDAPVMLDRMLRVLASYSILTYSLRTLPDG
KVERLYGLGPVCKFLTKSEDGASIGSLCLMNQDKVLMESWYNLKDAVLEG
GIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKLLENYNGFEG
LTSIVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGG
DMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCHAALPDNGKVIVAECIL
PVAPDTSLATKGVVHIDAIMLAHNPGGKERTEKEFEALAKGSGFQGFRVV
CSAFNTYAIEFLKKN
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mRNA from alignment at DQ886020:1876..4670+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>DQ886020.1-OMT3.m1 ID=DQ886020.1-OMT3.m1; Name=OMT3; organism=Malus x domestica; type=mRNA; length=2795bp; location=Sequence derived from: DQ886020:1876..4670+ (Malus x domestica
atgggttcgaccccagagactcagatgactccaacccaagtctccgatga
agaagccaacctcttcgccatgcagctagccagcgcctccgtcctcccca
tggtgctcaaggcagccatcgagctcgacctcctcgagatcatggcaaaa
gccgggcctggcgcttttgtttctccggctgacttatcttcgcagctgcc
gaccaagaaccctgacgcccccgtcatgctggaccgcatgctgcgcgtcc
tggccagctactctatcctcacttactccctccgcacacttcccgacggc
aaagtcgagcggctgtacggcctcggccccgtctgcaagttcttgacaaa
gagcgaggatggtgcttccattggttctctctgcctcatgaatcaggaca
aggtccttatggagagctggtaattaccattcttcttctttatttatcat
cttaatttgatcgttaacaaacattaattaatggggttcaaataggtcga
taataatacaatattcataaaatgttacgtactaactgtgagttatggct
ttaatatgtgattgttctctattttttcctaagaaaaactaataaaaatt
ggttcgaaaattttgagataaaataaatagtattttttaatgtaaaatta
agatttttttgttaaaataaataataacaaaatcttttcgttaaaattta
cttttttccaatgttttcttcgttgttcatattacttttggcccattagg
cggttggggacggacaagactccaaattgacttcttgtcaaacctttaaa
gaaaccaaaattttaaataaaaattttaaactaaatttcgtgtcattaat
aaaaaataaacatatttattaatgtttcaacttttaaataataattcaac
aattaattttcatattaattaatttttaaattttatttttctagcatgct
atatgatgactggtcacctgttttatgatttccacttaaatcaaattagg
agtggaaagttggtaaaaccacttcaccaaccacacctaagtggttcgat
gttacacgttttatttcttatcaaatcttttgccttaggacaactgtatg
ttttaactattttattcttctatatggagtgtaagttccgtcaattagct
agagggtgaaatttaaattaacttccttcctcatttttatcaaaacgata
aaaatgataatttgtactcaaatataaaaggatactattttactaactga
ttggcgcaatccatgtcaataaaagaccaacagatcctctccgaatcttc
tttgtgagaatcctgaagatctgtgaatcgtgcatcgtgttgtcagattt
catcaaatattgtttatgtttaattttaaataaaaaaatgaaaataattt
tataatcgtacgatgtacaatgaattgatatgatttacgaatctttaaga
ttcttaatattcctacaaagaggatccgaattcaataaaagaagggggag
ttgttttaacaaacccataaattatctgattattgtgagttatgcgggcc
ttgaaacacgtggaaggtcggttggcctagtttacaagattgcttgtact
ttggtactgtagataggaaaatgattctccggatcccttccaccaagtct
atcaagtccacttattcagactattgaaatttgattcaactattaaagtt
attataatttttaaaggggcctagctgttaaatcaaatttcaagggtccg
gccctttcctggtagattaagctttaaacacaaatgagtcatgcatgctt
gtttcgggtttgtgcaggtacaacttgaaagatgcagtccttgaaggagg
tattccattcaacaaggcctacggaatgactgcttttgagtaccatggca
ctgaccccagattcaacaaggtcttcaacaagggaatggctgaccactct
accattaccatgaagaaacttcttgagaactacaatggctttgagggcct
cacatccatcgttgatgttggtggtggcaccggcgctgtccttaacatga
tcgtctctaaatacccttcgattaagggcattaacttcgacttgcctcat
gtcatcgaagatgctccccaatatcctggtatgttcttcatttctaataa
tgttcgtagttcaattacttaaaagcactcacctttacattcgatctctc
aagttcaatttctcttcccctaatattattgcatataaaaataatacttg
tactatttatcatttttcctaatgaatatgaggtcaatggatgttgaata
taggtgtggagcatgttggaggagacatgtttgtaagtgttccaaaggga
gatgcaattttcatgaaggtgagttattatttatcaaaaaagaaccgatg
attatattgtagtgttaatattaatttctcataggagcttaggtgctcaa
tatatttggaactaatatcaaatcctttatgcaatcttacagtggatatg
ccacgactggagtgacgagcattgcttgaaatttttgaagaactgccatg
ctgcgctcccagacaatgggaaggtaattgttgctgagtgcattcttccg
gtagctccggacactagccttgccaccaagggagttgtccatatcgacgc
gatcatgttagctcacaaccccggcggaaaagagaggacggagaaggagt
tcgaggccttggctaagggatctggattccaaggctttcgagtcgtgtgc
tctgctttcaacacctatgccattgagtttcttaagaagaattga
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Coding sequence (CDS) from alignment at DQ886020:1876..4670+

>DQ886020.1-OMT3.m1 ID=DQ886020.1-OMT3.m1; Name=OMT3; organism=Malus x domestica; type=CDS; length=1098bp; location=Sequence derived from: DQ886020:1876..4670+ (Malus x domestica
atgggttcgaccccagagactcagatgactccaacccaagtctccgatga
agaagccaacctcttcgccatgcagctagccagcgcctccgtcctcccca
tggtgctcaaggcagccatcgagctcgacctcctcgagatcatggcaaaa
gccgggcctggcgcttttgtttctccggctgacttatcttcgcagctgcc
gaccaagaaccctgacgcccccgtcatgctggaccgcatgctgcgcgtcc
tggccagctactctatcctcacttactccctccgcacacttcccgacggc
aaagtcgagcggctgtacggcctcggccccgtctgcaagttcttgacaaa
gagcgaggatggtgcttccattggttctctctgcctcatgaatcaggaca
aggtccttatggagagctggtacaacttgaaagatgcagtccttgaagga
ggtattccattcaacaaggcctacggaatgactgcttttgagtaccatgg
cactgaccccagattcaacaaggtcttcaacaagggaatggctgaccact
ctaccattaccatgaagaaacttcttgagaactacaatggctttgagggc
ctcacatccatcgttgatgttggtggtggcaccggcgctgtccttaacat
gatcgtctctaaatacccttcgattaagggcattaacttcgacttgcctc
atgtcatcgaagatgctccccaatatcctggtgtggagcatgttggagga
gacatgtttgtaagtgttccaaagggagatgcaattttcatgaagtggat
atgccacgactggagtgacgagcattgcttgaaatttttgaagaactgcc
atgctgcgctcccagacaatgggaaggtaattgttgctgagtgcattctt
ccggtagctccggacactagccttgccaccaagggagttgtccatatcga
cgcgatcatgttagctcacaaccccggcggaaaagagaggacggagaagg
agttcgaggccttggctaagggatctggattccaaggctttcgagtcgtg
tgctctgctttcaacacctatgccattgagtttcttaagaagaattga
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