GBSS1-1, AJ534191.1-GBSS1-1.m1 (mRNA) Geum montanum

Transcript Overview
NameGBSS1-1
Unique NameAJ534191.1-GBSS1-1.m1
TypemRNA
OrganismGeum montanum ()
Sourcegenbank
Productgranule-bound starch synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GBSS1-1AJ534191.1-GBSS1-1Geum montanumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AJ534191.1-GBSS1-1.m1-cds1AJ534191.1-GBSS1-1.m1-cds1Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds2AJ534191.1-GBSS1-1.m1-cds2Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds3AJ534191.1-GBSS1-1.m1-cds3Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds4AJ534191.1-GBSS1-1.m1-cds4Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds5AJ534191.1-GBSS1-1.m1-cds5Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds6AJ534191.1-GBSS1-1.m1-cds6Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds7AJ534191.1-GBSS1-1.m1-cds7Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds8AJ534191.1-GBSS1-1.m1-cds8Geum montanumCDS
AJ534191.1-GBSS1-1.m1-cds9AJ534191.1-GBSS1-1.m1-cds9Geum montanumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GBSS1-1AJ534191.1-GBSS1-1.p1Geum montanumpolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GIUniProtKB/TrEMBL:Q7X9U0
nuccoreAJ534191.1
Alignments
Feature NameTypeLocationAnalysis
AJ534191 region AJ534191:1..1856+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>AJ534191.1-GBSS1-1.m1 ID=AJ534191.1-GBSS1-1.m1; Name=GBSS1-1; organism=Geum montanum; type=mRNA; length=846bp
tggtctgccgccggccatggcagcaaatggacaccgtgtgatgactgttt
cgccacggtatgatcaatacaaagatgcatgggatacaggagttacaact
gagcttcaagtaggtgataagattgagacggttcggttctttcactgctt
caagcgaggagtggatcgtgtttttgtagatcacccgttgtttcttgaaa
gggtttggggaaaaactgcatcaaaactatatggacctgttacaggagag
gattacaaggacaaccaacttagattcagcttgttatgtctggcagctct
agaggcaccgagagttctgaaccttaacagcaacaaatatttttcaggac
catatggtgaagatgttgtattcgttgccaacgactggcacactgccctc
ctcccatgctacctgaaagccaaataccaatctaaaggaatttatatgag
tgccaaagtagccttttgcattcccaatattgcttaccaagggagatttg
catttgtggacttctcacttctcaatctgccagactcatttaaaagttct
ttcgatttcattgatgactctgacaaaccagtaaaagggaggaaaattaa
ctggatgaaagctggaatgttagaatcaaacatagtgttgactgttagcc
cgtactacgccaaagaacttgtttcttcaattgataaaggagtggaattg
gataacattggtcggaaagttggagttcatggtattgtaaatggcatgga
tgtccaagagtggaacccgttaactgacaagtatacagacgtcaaatatg
atgctacaactgtgatggatgcaaagcctattttgaaagaagccct
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protein sequence of GBSS1-1

>AJ534191.1-GBSS1-1.p1 ID=AJ534191.1-GBSS1-1.p1; Name=GBSS1-1; organism=Geum montanum; type=polypeptide; length=282bp
GLPPAMAANGHRVMTVSPRYDQYKDAWDTGVTTELQVGDKIETVRFFHCF
KRGVDRVFVDHPLFLERVWGKTASKLYGPVTGEDYKDNQLRFSLLCLAAL
EAPRVLNLNSNKYFSGPYGEDVVFVANDWHTALLPCYLKAKYQSKGIYMS
AKVAFCIPNIAYQGRFAFVDFSLLNLPDSFKSSFDFIDDSDKPVKGRKIN
WMKAGMLESNIVLTVSPYYAKELVSSIDKGVELDNIGRKVGVHGIVNGMD
VQEWNPLTDKYTDVKYDATTVMDAKPILKEAL
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mRNA from alignment at AJ534191:1..1856+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AJ534191.1-GBSS1-1.m1 ID=AJ534191.1-GBSS1-1.m1; Name=GBSS1-1; organism=Geum montanum; type=mRNA; length=1856bp; location=Sequence derived from: AJ534191:1..1856+ (Geum montanum
tggtctgccgccggccatggcagtcagtactctttgtttgctgtgtttat
agtttatactgtgttttgatcgatgtgatgactttgtgtaagagagtagt
gaaactgatatgaaatttccaggcaaatggacaccgtgtgatgactgttt
cgccacggtatgatcaatacaaagatgcatgggatacaggagttacaact
gaggtgtgtctgtatatatgtgaaatcttcggcatttagaattttggata
cttgctgtgtaattttttgacaatgttgtgttgttatgtagcttcaagta
ggtgataagattgagacggttcggttctttcactgcttcaagcgaggagt
ggatcgtgtttttgtagatcacccgttgtttcttgaaagggttagctttt
tgagtcgttggttatatagtttcatactcacattacagtttgatctggta
tcagtgcttgatgagttatttttcaaggtttggggaaaaactgcatcaaa
actatatggacctgttacaggagaggattacaaggacaaccaacttagat
tcagcttgttatgtctggtataatctccatcgtcgtcactctgtgctttc
atttattattgggattctctggcatttatgttgtggaattgatcataaac
taaatataatttcctatgcctcactatatgcctatgttttccatgccttt
atgaccgaaaatgtaggctttttgagcaataggctcctttaaacatatga
aactggtcaagtaggcttcagggtcaaatttgccttttatatctctggta
aaaatggctggttttgagctacttattcaaagttaccctaatgatgccaa
gaaatgttttgtttatataacaatccttgcatcttataactgtacttgcc
actttatttatttttccagcgtttcttcatttaattctcatggttgtata
aaatggtatgtcttaggcagctctagaggcaccgagagttctgaacctta
acagcaacaaatatttttcaggaccatatggtaggagtttctgctacaaa
tctcttaaccagtaacttataaaacttgttatgcgctttataatgtgaat
ttcctacatacaggtgaagatgttgtattcgttgccaacgactggcacac
tgccctcctcccatgctacctgaaagccaaataccaatctaaaggaattt
atatgagtgccaaagtaagtgaccagttcatgttgagcacttgttgtgcc
catttctgtctgattgaaatccttatggtagccttccaatattgctacag
gtagccttttgcattcccaatattgcttaccaagggagatttgcatttgt
ggacttctcacttctcaatctgccagactcatttaaaagttctttcgatt
tcattgatgagtatggtttcctactttctttggcacattatgatagtatt
acgtacatgattgaatcttgagtatgactattctaattctacagctctga
caaaccagtaaaagggaggaaaattaactggatgaaagctggaatgttag
aatcaaacatagtgttgactgttagcccgtactacgccaaagaacttgtt
tcttcaattgataaaggagtggaattggataacattggtcggaaagttgg
agttcatggtattgtaaatggcatggatgtccaagagtggaacccgttaa
ctgacaagtatacagacgtcaaatatgatgctacaactgtaagaacaatt
ataatacttgcatttccatgaacagattctttgatttatatgtcaataat
tcgttaagcttggcttgctaggtgatggatgcaaagcctattttgaaaga
agccct
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Coding sequence (CDS) from alignment at AJ534191:1..1856+

>AJ534191.1-GBSS1-1.m1 ID=AJ534191.1-GBSS1-1.m1; Name=GBSS1-1; organism=Geum montanum; type=CDS; length=846bp; location=Sequence derived from: AJ534191:1..1856+ (Geum montanum
tggtctgccgccggccatggcagcaaatggacaccgtgtgatgactgttt
cgccacggtatgatcaatacaaagatgcatgggatacaggagttacaact
gagcttcaagtaggtgataagattgagacggttcggttctttcactgctt
caagcgaggagtggatcgtgtttttgtagatcacccgttgtttcttgaaa
gggtttggggaaaaactgcatcaaaactatatggacctgttacaggagag
gattacaaggacaaccaacttagattcagcttgttatgtctggcagctct
agaggcaccgagagttctgaaccttaacagcaacaaatatttttcaggac
catatggtgaagatgttgtattcgttgccaacgactggcacactgccctc
ctcccatgctacctgaaagccaaataccaatctaaaggaatttatatgag
tgccaaagtagccttttgcattcccaatattgcttaccaagggagatttg
catttgtggacttctcacttctcaatctgccagactcatttaaaagttct
ttcgatttcattgatgactctgacaaaccagtaaaagggaggaaaattaa
ctggatgaaagctggaatgttagaatcaaacatagtgttgactgttagcc
cgtactacgccaaagaacttgtttcttcaattgataaaggagtggaattg
gataacattggtcggaaagttggagttcatggtattgtaaatggcatgga
tgtccaagagtggaacccgttaactgacaagtatacagacgtcaaatatg
atgctacaactgtgatggatgcaaagcctattttgaaagaagccct
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