|
|
Transcript Overview
| Name | PRU1 |
|---|
| Unique Name | X78119.1-PRU1.m1 |
|---|
| Type | mRNA |
|---|
| Organism | Prunus dulcis (Almond) |
|---|
| Source | genbank |
|---|
| Product | prunin |
|---|
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| X78119.1-PRU1.m1-cds1 | X78119.1-PRU1.m1-cds1 | Prunus dulcis | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| PRU1 | X78119.1-PRU1.p1 | Prunus dulcis | polypeptide |
Cross References
External references for this mRNA
Alignments
| Feature Name | Type | Location | Analysis |
|---|
| X78119 |
region |
X78119:43..1698+ |
NCBI Rosaceae gene and mRNA sequences |
| scaffold_8 |
supercontig |
scaffold_8:19441427..19443415- |
Prunus persica Whole Genome v1.0 Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >X78119.1-PRU1.m1 ID=X78119.1-PRU1.m1; Name=PRU1; organism=Prunus dulcis; type=mRNA; length=1656bp
atggctaaggctttcgttttttcgctttgcttgcttctggttttcaatgg
ctgcttagcggcacgccagtcccagttgagtccgcagaaccagtgccagc
tcaaccagcttcaagcccgcgaacccgacaaccgcatccaggctgaggcg
ggtcagatcgagacctggaacttcaaccagggggacttccagtgtgccgg
ggtcgccgcctctcgaatcaccattcagcgcaacggcctacacttgcctt
cctactccaacgcccctcaactcatctacatcgtccaaggtaggggtgtt
ctaggggcagtgttctctgggtgccctgagactttcgaagagtctcagca
gtcttctcagcagggccgccagcaggaacaggaacaggaacgacaacaac
aacaacagggagaacaaggacgacaacagggccaacaagagcagcagcag
gaacgacaaggaagacaacaagggagacagcaacaagaagaaggaagaca
acaagagcagcagcaaggccaacaagggcgcccgcaacaacaacaacaat
tccgacagctcgaccgccaccagaagacccgccgcatccgtgagggtgat
gttgtcgccatccctgccggagtcgcctactggtcctacaacgacggcga
ccaggagcttgttgcagtcaaccttttccacgtcagcagcgatcacaacc
agctcgaccaaaacccaaggaaattctatctagctggtaacccagagaat
gagtttaaccaacaaggccaaagccaaccccgccagcagggtgagcaagg
gcgtcccggacagcatcagcaaccattcggacgtcccagacaacaagaac
aacaaggaaacggcaacaacgtcttctccggcttcaacacacagctcctc
gcccaggccctcaacgtcaacgaagagactgccaggaacctccagggaca
gaacgacaacaggaaccaaatcatccaggtaaggggcaacctcgacttcg
tccagcccccaaggggacgacaggagcgtgagcacgaggagcgacaacag
gagcagctccagcaggagaggcaacaacaaggagaacaactgatggccaa
cggtcttgaggagaccttctgcagcttgaggttgaaggagaacatcggca
accctgagcgtgccgacatcttctctccccgggcaggccgcatcagcacc
ctcaacagccacaacctccccatcctcaggtttctccgcctcagcgccga
gagaggcttcttctaccgcaatggtatctacagcccacactggaatgtga
acgcccactcagtggtgtacgtgatcagaggaaatgctagggttcaggtg
gtgaacgagaacggagatgcaattcttgaccaggaggtgcagcagggaca
gctgttcatagtcccacagaaccacggtgtgatccagcaagccggcaacc
aagggttcgagtactttgccttcaagacggaggaaaatgcgttcattaac
accttggccggacgaacctccttcctccgtgcactgccggatgaggtgct
ggccaacgcctaccaaatttctcgagagcaggcgaggcagctcaagtaca
accggcaggagaccattgccttgagctccagccagcagaggagggcagtt
gtataa back to topprotein sequence of PRU1 >X78119.1-PRU1.p1 ID=X78119.1-PRU1.p1; Name=PRU1; organism=Prunus dulcis; type=polypeptide; length=551bp
MAKAFVFSLCLLLVFNGCLAARQSQLSPQNQCQLNQLQAREPDNRIQAEA
GQIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSNAPQLIYIVQGRGV
LGAVFSGCPETFEESQQSSQQGRQQEQEQERQQQQQGEQGRQQGQQEQQQ
ERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGD
VVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPEN
EFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQGNGNNVFSGFNTQLL
AQALNVNEETARNLQGQNDNRNQIIQVRGNLDFVQPPRGRQEREHEERQQ
EQLQQERQQQGEQLMANGLEETFCSLRLKENIGNPERADIFSPRAGRIST
LNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQV
VNENGDAILDQEVQQGQLFIVPQNHGVIQQAGNQGFEYFAFKTEENAFIN
TLAGRTSFLRALPDEVLANAYQISREQARQLKYNRQETIALSSSQQRRAV
V back to topmRNA from alignment at X78119:43..1698+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >X78119.1-PRU1.m1 ID=X78119.1-PRU1.m1; Name=PRU1; organism=Prunus dulcis; type=mRNA; length=1656bp; location=Sequence derived from: X78119:43..1698+ (Prunus dulcis
atggctaaggctttcgttttttcgctttgcttgcttctggttttcaatgg
ctgcttagcggcacgccagtcccagttgagtccgcagaaccagtgccagc
tcaaccagcttcaagcccgcgaacccgacaaccgcatccaggctgaggcg
ggtcagatcgagacctggaacttcaaccagggggacttccagtgtgccgg
ggtcgccgcctctcgaatcaccattcagcgcaacggcctacacttgcctt
cctactccaacgcccctcaactcatctacatcgtccaaggtaggggtgtt
ctaggggcagtgttctctgggtgccctgagactttcgaagagtctcagca
gtcttctcagcagggccgccagcaggaacaggaacaggaacgacaacaac
aacaacagggagaacaaggacgacaacagggccaacaagagcagcagcag
gaacgacaaggaagacaacaagggagacagcaacaagaagaaggaagaca
acaagagcagcagcaaggccaacaagggcgcccgcaacaacaacaacaat
tccgacagctcgaccgccaccagaagacccgccgcatccgtgagggtgat
gttgtcgccatccctgccggagtcgcctactggtcctacaacgacggcga
ccaggagcttgttgcagtcaaccttttccacgtcagcagcgatcacaacc
agctcgaccaaaacccaaggaaattctatctagctggtaacccagagaat
gagtttaaccaacaaggccaaagccaaccccgccagcagggtgagcaagg
gcgtcccggacagcatcagcaaccattcggacgtcccagacaacaagaac
aacaaggaaacggcaacaacgtcttctccggcttcaacacacagctcctc
gcccaggccctcaacgtcaacgaagagactgccaggaacctccagggaca
gaacgacaacaggaaccaaatcatccaggtaaggggcaacctcgacttcg
tccagcccccaaggggacgacaggagcgtgagcacgaggagcgacaacag
gagcagctccagcaggagaggcaacaacaaggagaacaactgatggccaa
cggtcttgaggagaccttctgcagcttgaggttgaaggagaacatcggca
accctgagcgtgccgacatcttctctccccgggcaggccgcatcagcacc
ctcaacagccacaacctccccatcctcaggtttctccgcctcagcgccga
gagaggcttcttctaccgcaatggtatctacagcccacactggaatgtga
acgcccactcagtggtgtacgtgatcagaggaaatgctagggttcaggtg
gtgaacgagaacggagatgcaattcttgaccaggaggtgcagcagggaca
gctgttcatagtcccacagaaccacggtgtgatccagcaagccggcaacc
aagggttcgagtactttgccttcaagacggaggaaaatgcgttcattaac
accttggccggacgaacctccttcctccgtgcactgccggatgaggtgct
ggccaacgcctaccaaatttctcgagagcaggcgaggcagctcaagtaca
accggcaggagaccattgccttgagctccagccagcagaggagggcagtt
gtataa back to topCoding sequence (CDS) from alignment at X78119:43..1698+ >X78119.1-PRU1.m1 ID=X78119.1-PRU1.m1; Name=PRU1; organism=Prunus dulcis; type=CDS; length=1656bp; location=Sequence derived from: X78119:43..1698+ (Prunus dulcis
atggctaaggctttcgttttttcgctttgcttgcttctggttttcaatgg
ctgcttagcggcacgccagtcccagttgagtccgcagaaccagtgccagc
tcaaccagcttcaagcccgcgaacccgacaaccgcatccaggctgaggcg
ggtcagatcgagacctggaacttcaaccagggggacttccagtgtgccgg
ggtcgccgcctctcgaatcaccattcagcgcaacggcctacacttgcctt
cctactccaacgcccctcaactcatctacatcgtccaaggtaggggtgtt
ctaggggcagtgttctctgggtgccctgagactttcgaagagtctcagca
gtcttctcagcagggccgccagcaggaacaggaacaggaacgacaacaac
aacaacagggagaacaaggacgacaacagggccaacaagagcagcagcag
gaacgacaaggaagacaacaagggagacagcaacaagaagaaggaagaca
acaagagcagcagcaaggccaacaagggcgcccgcaacaacaacaacaat
tccgacagctcgaccgccaccagaagacccgccgcatccgtgagggtgat
gttgtcgccatccctgccggagtcgcctactggtcctacaacgacggcga
ccaggagcttgttgcagtcaaccttttccacgtcagcagcgatcacaacc
agctcgaccaaaacccaaggaaattctatctagctggtaacccagagaat
gagtttaaccaacaaggccaaagccaaccccgccagcagggtgagcaagg
gcgtcccggacagcatcagcaaccattcggacgtcccagacaacaagaac
aacaaggaaacggcaacaacgtcttctccggcttcaacacacagctcctc
gcccaggccctcaacgtcaacgaagagactgccaggaacctccagggaca
gaacgacaacaggaaccaaatcatccaggtaaggggcaacctcgacttcg
tccagcccccaaggggacgacaggagcgtgagcacgaggagcgacaacag
gagcagctccagcaggagaggcaacaacaaggagaacaactgatggccaa
cggtcttgaggagaccttctgcagcttgaggttgaaggagaacatcggca
accctgagcgtgccgacatcttctctccccgggcaggccgcatcagcacc
ctcaacagccacaacctccccatcctcaggtttctccgcctcagcgccga
gagaggcttcttctaccgcaatggtatctacagcccacactggaatgtga
acgcccactcagtggtgtacgtgatcagaggaaatgctagggttcaggtg
gtgaacgagaacggagatgcaattcttgaccaggaggtgcagcagggaca
gctgttcatagtcccacagaaccacggtgtgatccagcaagccggcaacc
aagggttcgagtactttgccttcaagacggaggaaaatgcgttcattaac
accttggccggacgaacctccttcctccgtgcactgccggatgaggtgct
ggccaacgcctaccaaatttctcgagagcaggcgaggcagctcaagtaca
accggcaggagaccattgccttgagctccagccagcagaggagggcagtt
gtataa back to top
|
