EG1, AJ006348.1-EG1.m1 (mRNA) Fragaria x ananassa

Transcript Overview
NameEG1
Unique NameAJ006348.1-EG1.m1
TypemRNA
OrganismFragaria x ananassa (Strawberry)
Sourcegenbank
Productendo-beta-1,4-glucanase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AJ006348.1-EG1.m1-cds1AJ006348.1-EG1.m1-cds1Fragaria x ananassaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
EG1AJ006348.1-EG1.p1Fragaria x ananassapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GIUniProtKB/TrEMBL:Q9SBT6
nuccoreAJ006348.1
Alignments
Feature NameTypeLocationAnalysis
AJ006348 region AJ006348:23..1513+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>AJ006348.1-EG1.m1 ID=AJ006348.1-EG1.m1; Name=EG1; organism=Fragaria x ananassa; type=mRNA; length=1491bp
atggcgcgaaatggcctttgcttaccgggaaatgctcccgcatttcgcgc
aacactcgtcctctcgctgctcctgcttctccagccaatccgcgccggcc
acgactaccacgacgccctccgcaagagcatcctcttcttcgaaggccag
cgctccggcaagctcccgcccgatcaacgcctcaaatggcgccgcgactc
cgcattgcacgacggctccaccgccggcgtagacttaaccggcggctact
acgacgccggcgacaacgtgaagttcgggtttccgatggcgttcacgacc
actctgctggcgtggagcattatagacttcgggagggtcatggggacgga
gcagaggaacgcggtcaaggcgttacggtgggggacagactacctcctga
aggccacggcggttcctggcgtcgtcttcgtccaagtcggcgacccatac
tccgatcacaactgctgggagaggccggaagacatggacacacgccgcac
ggtgtacaaaatcgaccacaacaacccgggatccgacgtggcaggcgaaa
ccgcagccgcgctcgccgccgcctctatcgttttcaggtcacgtgacccc
gcttactcgagactgcttctcaatcgagccgttaaggttttcgagttcgc
tgatacccaccgcggcgcgtacagctccagcctcaaaaacgccgtgtgcc
ctttttactgcgacgtcaacggcttccaggatgagttactgtggggagca
gcgtggttgcacaaggcgtcgagaaggcggcagtacagagaatacatagt
gagaaacgaggtcattttgagagctggagataccattaacgagtttggtt
gggataacaagcatgctgggattaatattctcatttctaaggaagtgctt
atgggaaaagcagattatttcgaatctttcaagcaaaatgcagatggatt
tatatgctctgttttgcctggacttgcccatacccaagcccaatattctc
caggtggtttgatcttcaagcctggagggagtaacatgcagcatgtaact
tcgctatcgttcctgcttttgacttattccaactatctaagccacgccaa
taagaacgtgccgtgtggcatgacctccgcctccccggccttcctcaaac
aattggctaaacgccaggtggattacattttgggtgacaatccattaaga
atgtcttacatggttggatatgggccgcgttacccgcagaggattcacca
ccggggcagctcacttccatccgtgcaggcccatccggcccgtatcggat
gcaaagccggttctcgttattttctgagtccgaatccaaacccgaataaa
ttagttggggcggttgtgggcggacccaatagctcggatgcatttccgga
ctcgaggccttactttcaagagtctgagcccacgacgtacataaatgcgc
cgcttgtgggcctactttcgtattttgcagcccattactga
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protein sequence of EG1

>AJ006348.1-EG1.p1 ID=AJ006348.1-EG1.p1; Name=EG1; organism=Fragaria x ananassa; type=polypeptide; length=518bp
MARNGLCLPGNAPAFRATLVLSLLLLLQPIRAGHDYHDALRKSILFFEGQ
RSGKLPPDQRLKWRRDSALHDGSTAGVDLTGGYYDAGDNVKFGFPMAFTT
TLLAWSIIDFGRVMGTEQRNAVKALRWGTDYLLKATAVPGVVFVQVGDPY
SDHNCWERPEDMDTRRTVYKIDHNNPGSDVAGETAAALAAASIVFRSRDP
AYSRLLLNRAVKVFEFADTHRGAYSSSLKNAVCPFYCDVNGFQDELLWGA
AWLHKASRRRQYREYIVRNEVILRAGDTINEFGWDNKHAGINILISKEVL
MGKADYFESFKQNADGFICSVLPGLAHTQAQYSPGGLIFKPGGSNMQHVT
SLSFLLLTYSNYLSHANKNVPCGMTSASPAFLKQLAKRQVDYILGDNPLR
MSYMVGYGPRYPQRIHHRGSSLPSVQAHPARIGCKAGSRYFLSPNPNPNK
LVGAVVGGPNSSDAFPDSRPYFQESEPTTYINAPLVGLLSYFAAHYtran
sit_peptide23..112
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mRNA from alignment at AJ006348:23..1513+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AJ006348.1-EG1.m1 ID=AJ006348.1-EG1.m1; Name=EG1; organism=Fragaria x ananassa; type=mRNA; length=1491bp; location=Sequence derived from: AJ006348:23..1513+ (Fragaria x ananassa
atggcgcgaaatggcctttgcttaccgggaaatgctcccgcatttcgcgc
aacactcgtcctctcgctgctcctgcttctccagccaatccgcgccggcc
acgactaccacgacgccctccgcaagagcatcctcttcttcgaaggccag
cgctccggcaagctcccgcccgatcaacgcctcaaatggcgccgcgactc
cgcattgcacgacggctccaccgccggcgtagacttaaccggcggctact
acgacgccggcgacaacgtgaagttcgggtttccgatggcgttcacgacc
actctgctggcgtggagcattatagacttcgggagggtcatggggacgga
gcagaggaacgcggtcaaggcgttacggtgggggacagactacctcctga
aggccacggcggttcctggcgtcgtcttcgtccaagtcggcgacccatac
tccgatcacaactgctgggagaggccggaagacatggacacacgccgcac
ggtgtacaaaatcgaccacaacaacccgggatccgacgtggcaggcgaaa
ccgcagccgcgctcgccgccgcctctatcgttttcaggtcacgtgacccc
gcttactcgagactgcttctcaatcgagccgttaaggttttcgagttcgc
tgatacccaccgcggcgcgtacagctccagcctcaaaaacgccgtgtgcc
ctttttactgcgacgtcaacggcttccaggatgagttactgtggggagca
gcgtggttgcacaaggcgtcgagaaggcggcagtacagagaatacatagt
gagaaacgaggtcattttgagagctggagataccattaacgagtttggtt
gggataacaagcatgctgggattaatattctcatttctaaggaagtgctt
atgggaaaagcagattatttcgaatctttcaagcaaaatgcagatggatt
tatatgctctgttttgcctggacttgcccatacccaagcccaatattctc
caggtggtttgatcttcaagcctggagggagtaacatgcagcatgtaact
tcgctatcgttcctgcttttgacttattccaactatctaagccacgccaa
taagaacgtgccgtgtggcatgacctccgcctccccggccttcctcaaac
aattggctaaacgccaggtggattacattttgggtgacaatccattaaga
atgtcttacatggttggatatgggccgcgttacccgcagaggattcacca
ccggggcagctcacttccatccgtgcaggcccatccggcccgtatcggat
gcaaagccggttctcgttattttctgagtccgaatccaaacccgaataaa
ttagttggggcggttgtgggcggacccaatagctcggatgcatttccgga
ctcgaggccttactttcaagagtctgagcccacgacgtacataaatgcgc
cgcttgtgggcctactttcgtattttgcagcccattactga
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Coding sequence (CDS) from alignment at AJ006348:23..1513+

>AJ006348.1-EG1.m1 ID=AJ006348.1-EG1.m1; Name=EG1; organism=Fragaria x ananassa; type=CDS; length=1491bp; location=Sequence derived from: AJ006348:23..1513+ (Fragaria x ananassa
atggcgcgaaatggcctttgcttaccgggaaatgctcccgcatttcgcgc
aacactcgtcctctcgctgctcctgcttctccagccaatccgcgccggcc
acgactaccacgacgccctccgcaagagcatcctcttcttcgaaggccag
cgctccggcaagctcccgcccgatcaacgcctcaaatggcgccgcgactc
cgcattgcacgacggctccaccgccggcgtagacttaaccggcggctact
acgacgccggcgacaacgtgaagttcgggtttccgatggcgttcacgacc
actctgctggcgtggagcattatagacttcgggagggtcatggggacgga
gcagaggaacgcggtcaaggcgttacggtgggggacagactacctcctga
aggccacggcggttcctggcgtcgtcttcgtccaagtcggcgacccatac
tccgatcacaactgctgggagaggccggaagacatggacacacgccgcac
ggtgtacaaaatcgaccacaacaacccgggatccgacgtggcaggcgaaa
ccgcagccgcgctcgccgccgcctctatcgttttcaggtcacgtgacccc
gcttactcgagactgcttctcaatcgagccgttaaggttttcgagttcgc
tgatacccaccgcggcgcgtacagctccagcctcaaaaacgccgtgtgcc
ctttttactgcgacgtcaacggcttccaggatgagttactgtggggagca
gcgtggttgcacaaggcgtcgagaaggcggcagtacagagaatacatagt
gagaaacgaggtcattttgagagctggagataccattaacgagtttggtt
gggataacaagcatgctgggattaatattctcatttctaaggaagtgctt
atgggaaaagcagattatttcgaatctttcaagcaaaatgcagatggatt
tatatgctctgttttgcctggacttgcccatacccaagcccaatattctc
caggtggtttgatcttcaagcctggagggagtaacatgcagcatgtaact
tcgctatcgttcctgcttttgacttattccaactatctaagccacgccaa
taagaacgtgccgtgtggcatgacctccgcctccccggccttcctcaaac
aattggctaaacgccaggtggattacattttgggtgacaatccattaaga
atgtcttacatggttggatatgggccgcgttacccgcagaggattcacca
ccggggcagctcacttccatccgtgcaggcccatccggcccgtatcggat
gcaaagccggttctcgttattttctgagtccgaatccaaacccgaataaa
ttagttggggcggttgtgggcggacccaatagctcggatgcatttccgga
ctcgaggccttactttcaagagtctgagcccacgacgtacataaatgcgc
cgcttgtgggcctactttcgtattttgcagcccattactga
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