SAMDC, AB077441.2-SAMDC.m1 (mRNA) Malus x domestica

Transcript Overview
NameSAMDC
Unique NameAB077441.2-SAMDC.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductS-adenosylmethionine decarboxylase
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AB077441regionAB077441:510..1586 +NCBI Rosaceae gene and mRNA sequencesn/a
Chr13chromosomeChr13:3730138..3731223 +Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotationn/a
chr13chromosomeSAMDC:1..1077 .
chr13:3325453..3326538 +		n/a
chr13chromosomeSAMDC:1..1077 .
chr13:3356916..3357992 -		n/a
chr13chromosomeSAMDC:1..1077 .
chr13:3314185..3315261 +		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AB077441.2-SAMDC.m1-cds1AB077441.2-SAMDC.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SAMDCAB077441.2-SAMDC.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI27597158
nuccoreAB077441.2
Sequences
The following sequences are available for this feature:

mRNA sequence

>AB077441.2-SAMDC.m1 ID=AB077441.2-SAMDC.m1; Name=SAMDC; organism=Malus x domestica; type=mRNA; length=1077bp
atggccatggagggatctgctattggatttgaaggttatgaaaagaggct
agaaatagcatttttcgagccgagtatctttctcgaccctgaaggaaggg
gtcttcggtctctgtccaaagctcagatagatgaatttcttgaccaagct
gagtgcaccatcgtctcgtcattgtcgaatgacgatgttgactcatatgt
tctttctgagtcaagcctctttattcatccatacaagatgatcatcaaaa
cttgtggcacaaccaagttgctccgtgtgatcccgactgtcctgcagttg
gctgaaaccatttcccttgctgtgagatctgtgaagtacactcgtgggag
tttcatttttccgggagcacagacgtaccctcatcgtagcttctcagaag
aagtttcggtcctcgacagctacttcgggaagcttgggtcaggtagcagg
gcgtatgtgatgggcaggtcagacggacctcagaagtggcatgtgtattc
tgcgactgccgaatcagcaagcttcgttgaacctgtgtacactcttgaaa
tgtgcatgactggtttggacaggggaaaggcttctgtattctacaaatct
gaatcgagctcagccacaacaatgacaaacgaatctggtatccgaaaaat
ccttccagattccgatatttgtgatttcgagtttgacccctgtggttatt
ccatgaattccatcgaaggagctgcaatttcgaccattcacgtcacacca
gaagatggcttcagttatgcaagttttgaaaccgctggatatgatctgaa
agatgtaaacttgaaccagttggttgagagggtattggtttgtttccaac
caaaagaattctccatagctgtgcatgccaatgttgttagcaagtcactc
cagcaacattctctcgtcgatctgaagggatactgtcgcgaagagagcag
ccacgaagagcttggactgggtggagccattgtctaccagaggttcctga
agactgagcggtgcggttctcctcgatcaactctcaagggctgctggaga
gaggaagaagaggaagaagattattaa
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protein sequence of SAMDC

>AB077441.2-SAMDC.p1 ID=AB077441.2-SAMDC.p1; Name=SAMDC; organism=Malus x domestica; type=polypeptide; length=358bp
MAMEGSAIGFEGYEKRLEIAFFEPSIFLDPEGRGLRSLSKAQIDEFLDQA
ECTIVSSLSNDDVDSYVLSESSLFIHPYKMIIKTCGTTKLLRVIPTVLQL
AETISLAVRSVKYTRGSFIFPGAQTYPHRSFSEEVSVLDSYFGKLGSGSR
AYVMGRSDGPQKWHVYSATAESASFVEPVYTLEMCMTGLDRGKASVFYKS
ESSSATTMTNESGIRKILPDSDICDFEFDPCGYSMNSIEGAAISTIHVTP
EDGFSYASFETAGYDLKDVNLNQLVERVLVCFQPKEFSIAVHANVVSKSL
QQHSLVDLKGYCREESSHEELGLGGAIVYQRFLKTERCGSPRSTLKGCWR
EEEEEEDY
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mRNA from alignment at AB077441:510..1586+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AB077441.2-SAMDC.m1 ID=AB077441.2-SAMDC.m1; Name=SAMDC; organism=Malus x domestica; type=mRNA; length=1077bp; location=Sequence derived from: AB077441:510..1586+ (Malus x domestica
atggccatggagggatctgctattggatttgaaggttatgaaaagaggct
agaaatagcatttttcgagccgagtatctttctcgaccctgaaggaaggg
gtcttcggtctctgtccaaagctcagatagatgaatttcttgaccaagct
gagtgcaccatcgtctcgtcattgtcgaatgacgatgttgactcatatgt
tctttctgagtcaagcctctttattcatccatacaagatgatcatcaaaa
cttgtggcacaaccaagttgctccgtgtgatcccgactgtcctgcagttg
gctgaaaccatttcccttgctgtgagatctgtgaagtacactcgtgggag
tttcatttttccgggagcacagacgtaccctcatcgtagcttctcagaag
aagtttcggtcctcgacagctacttcgggaagcttgggtcaggtagcagg
gcgtatgtgatgggcaggtcagacggacctcagaagtggcatgtgtattc
tgcgactgccgaatcagcaagcttcgttgaacctgtgtacactcttgaaa
tgtgcatgactggtttggacaggggaaaggcttctgtattctacaaatct
gaatcgagctcagccacaacaatgacaaacgaatctggtatccgaaaaat
ccttccagattccgatatttgtgatttcgagtttgacccctgtggttatt
ccatgaattccatcgaaggagctgcaatttcgaccattcacgtcacacca
gaagatggcttcagttatgcaagttttgaaaccgctggatatgatctgaa
agatgtaaacttgaaccagttggttgagagggtattggtttgtttccaac
caaaagaattctccatagctgtgcatgccaatgttgttagcaagtcactc
cagcaacattctctcgtcgatctgaagggatactgtcgcgaagagagcag
ccacgaagagcttggactgggtggagccattgtctaccagaggttcctga
agactgagcggtgcggttctcctcgatcaactctcaagggctgctggaga
gaggaagaagaggaagaagattattaa
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Coding sequence (CDS) from alignment at AB077441:510..1586+

>AB077441.2-SAMDC.m1 ID=AB077441.2-SAMDC.m1; Name=SAMDC; organism=Malus x domestica; type=CDS; length=1077bp; location=Sequence derived from: AB077441:510..1586+ (Malus x domestica
atggccatggagggatctgctattggatttgaaggttatgaaaagaggct
agaaatagcatttttcgagccgagtatctttctcgaccctgaaggaaggg
gtcttcggtctctgtccaaagctcagatagatgaatttcttgaccaagct
gagtgcaccatcgtctcgtcattgtcgaatgacgatgttgactcatatgt
tctttctgagtcaagcctctttattcatccatacaagatgatcatcaaaa
cttgtggcacaaccaagttgctccgtgtgatcccgactgtcctgcagttg
gctgaaaccatttcccttgctgtgagatctgtgaagtacactcgtgggag
tttcatttttccgggagcacagacgtaccctcatcgtagcttctcagaag
aagtttcggtcctcgacagctacttcgggaagcttgggtcaggtagcagg
gcgtatgtgatgggcaggtcagacggacctcagaagtggcatgtgtattc
tgcgactgccgaatcagcaagcttcgttgaacctgtgtacactcttgaaa
tgtgcatgactggtttggacaggggaaaggcttctgtattctacaaatct
gaatcgagctcagccacaacaatgacaaacgaatctggtatccgaaaaat
ccttccagattccgatatttgtgatttcgagtttgacccctgtggttatt
ccatgaattccatcgaaggagctgcaatttcgaccattcacgtcacacca
gaagatggcttcagttatgcaagttttgaaaccgctggatatgatctgaa
agatgtaaacttgaaccagttggttgagagggtattggtttgtttccaac
caaaagaattctccatagctgtgcatgccaatgttgttagcaagtcactc
cagcaacattctctcgtcgatctgaagggatactgtcgcgaagagagcag
ccacgaagagcttggactgggtggagccattgtctaccagaggttcctga
agactgagcggtgcggttctcctcgatcaactctcaagggctgctggaga
gaggaagaagaggaagaagattattaa
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