PolA1, LC010550.1-PolA1.m1 (mRNA) Prunus sargentii

Transcript Overview


Name	PolA1
Unique Name	LC010550.1-PolA1.m1
Type	mRNA
Organism	Prunus sargentii ()
Source	genbank
Product	largest subunit of RNA polymerase I
Genbank Note	exon 20 of RNA polymerase I largest subunit

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
LC010550	region	LC010550:1..851 +	NCBI Rosaceae gene and mRNA sequences	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
PolA1	LC010550.1-PolA1	Prunus sargentii	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LC010550.1-PolA1.m1-cds1	LC010550.1-PolA1.m1-cds1	Prunus sargentii	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
PolA1	LC010550.1-PolA1.p1	Prunus sargentii	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	953266335
nuccore	LC010550.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at LC010550:1..851+
coding sequence from alignment at LC010550:1..851+

mRNA sequence

>LC010550.1-PolA1.m1 ID=LC010550.1-PolA1.m1; Name=PolA1; organism=Prunus sargentii; type=mRNA; length=851bp
agggaggaagctcagcagctagctgataagttgaagaaaatcactgtggc
agacataattgagagtatgaaagtaacctttgtgccattttccattcagg
atggtcaaacttgccgtatttataagcttgagatgacactccacatacct
gaacatcttcaaaccattgttgaatattcatcagaagattgggaggaaat
cctagaggttgtgtttgttagggagttggaagacgccatacaaaatcata
ttcttttgctttctaaaattagtggtattaaaaatttcatgcctgattca
caaccgaaggcatcaaatgagacagatgaaaatcgttctgaaaaaagatc
tcaacgtgaggaagaagatgatgacaatggtggtgcagatgatggtgaac
atggtgaaggggtcgaggattttggtctggatgcacataagcgaaagcta
caagctacagatgagatggattatgaagatggctgtgatgatgaagtgag
agaagcagacttgtcagatggagatgaaagtgaaattgatgaggaggaaa
gtgaagttgaaattggtaaggatgatgaaattggggttatcgatgctagt
gatgaaatgcctggatgtcctttagaagaagctggtggaagtcctttaga
agaagctggggacctagctaagcccaagtcaaaggagaaaaagaccaaat
cgggaacccaaattagaaagaaaaggaaggtccgagcagagatggtaaaa
aaggagactgacagggcaatttttgtatcagcaaaggggttccactttga
ggtccattttagatttaccgacaatgaacctcatattttgctgtctcagg
t

protein sequence of PolA1

>LC010550.1-PolA1.p1 ID=LC010550.1-PolA1.p1; Name=PolA1; organism=Prunus sargentii; type=polypeptide; length=284bp
REEAQQLADKLKKITVADIIESMKVTFVPFSIQDGQTCRIYKLEMTLHIP
EHLQTIVEYSSEDWEEILEVVFVRELEDAIQNHILLLSKISGIKNFMPDS
QPKASNETDENRSEKRSQREEEDDDNGGADDGEHGEGVEDFGLDAHKRKL
QATDEMDYEDGCDDEVREADLSDGDESEIDEEESEVEIGKDDEIGVIDAS
DEMPGCPLEEAGGSPLEEAGDLAKPKSKEKKTKSGTQIRKKRKVRAEMVK
KETDRAIFVSAKGFHFEVHFRFTDNEPHILLSQV

mRNA from alignment at LC010550:1..851+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>LC010550.1-PolA1.m1 ID=LC010550.1-PolA1.m1; Name=PolA1; organism=Prunus sargentii; type=mRNA; length=851bp; location=Sequence derived from: LC010550:1..851+ (Prunus sargentii
agggaggaagctcagcagctagctgataagttgaagaaaatcactgtggc
agacataattgagagtatgaaagtaacctttgtgccattttccattcagg
atggtcaaacttgccgtatttataagcttgagatgacactccacatacct
gaacatcttcaaaccattgttgaatattcatcagaagattgggaggaaat
cctagaggttgtgtttgttagggagttggaagacgccatacaaaatcata
ttcttttgctttctaaaattagtggtattaaaaatttcatgcctgattca
caaccgaaggcatcaaatgagacagatgaaaatcgttctgaaaaaagatc
tcaacgtgaggaagaagatgatgacaatggtggtgcagatgatggtgaac
atggtgaaggggtcgaggattttggtctggatgcacataagcgaaagcta
caagctacagatgagatggattatgaagatggctgtgatgatgaagtgag
agaagcagacttgtcagatggagatgaaagtgaaattgatgaggaggaaa
gtgaagttgaaattggtaaggatgatgaaattggggttatcgatgctagt
gatgaaatgcctggatgtcctttagaagaagctggtggaagtcctttaga
agaagctggggacctagctaagcccaagtcaaaggagaaaaagaccaaat
cgggaacccaaattagaaagaaaaggaaggtccgagcagagatggtaaaa
aaggagactgacagggcaatttttgtatcagcaaaggggttccactttga
ggtccattttagatttaccgacaatgaacctcatattttgctgtctcagg
t

Coding sequence (CDS) from alignment at LC010550:1..851+

>LC010550.1-PolA1.m1 ID=LC010550.1-PolA1.m1; Name=PolA1; organism=Prunus sargentii; type=CDS; length=851bp; location=Sequence derived from: LC010550:1..851+ (Prunus sargentii
agggaggaagctcagcagctagctgataagttgaagaaaatcactgtggc
agacataattgagagtatgaaagtaacctttgtgccattttccattcagg
atggtcaaacttgccgtatttataagcttgagatgacactccacatacct
gaacatcttcaaaccattgttgaatattcatcagaagattgggaggaaat
cctagaggttgtgtttgttagggagttggaagacgccatacaaaatcata
ttcttttgctttctaaaattagtggtattaaaaatttcatgcctgattca
caaccgaaggcatcaaatgagacagatgaaaatcgttctgaaaaaagatc
tcaacgtgaggaagaagatgatgacaatggtggtgcagatgatggtgaac
atggtgaaggggtcgaggattttggtctggatgcacataagcgaaagcta
caagctacagatgagatggattatgaagatggctgtgatgatgaagtgag
agaagcagacttgtcagatggagatgaaagtgaaattgatgaggaggaaa
gtgaagttgaaattggtaaggatgatgaaattggggttatcgatgctagt
gatgaaatgcctggatgtcctttagaagaagctggtggaagtcctttaga
agaagctggggacctagctaagcccaagtcaaaggagaaaaagaccaaat
cgggaacccaaattagaaagaaaaggaaggtccgagcagagatggtaaaa
aaggagactgacagggcaatttttgtatcagcaaaggggttccactttga
ggtccattttagatttaccgacaatgaacctcatattttgctgtctcagg
t