CBFe-1, KR676532.1-CBFe-1.m1 (mRNA) Prunus mume

Transcript Overview
NameCBFe-1
Unique NameKR676532.1-CBFe-1.m1
TypemRNA
OrganismPrunus mume ()
Sourcegenbank
ProductCBF/DREB1-like protein e-1
Genbank NotePmCBFe-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFe-1KR676532.1-CBFe-1Prunus mumegene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KR676532.1-CBFe-1.m1-5utr1KR676532.1-CBFe-1.m1-5utr1Prunus mumefive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KR676532.1-CBFe-1.m1-cds1KR676532.1-CBFe-1.m1-cds1Prunus mumeCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KR676532.1-CBFe-1.m1-3utr1KR676532.1-CBFe-1.m1-3utr1Prunus mumethree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFe-1KR676532.1-CBFe-1.p1Prunus mumepolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI950925501
nuccoreKR676532.1
Alignments
Feature NameTypeLocationAnalysis
KR676532.1-CBFe-1.m1-5utr1 five_prime_UTR KR676532.1-CBFe-1.m1-5utr1:1..15+ NCBI Rosaceae gene and mRNA sequences
KR676532.1-CBFe-1.m1-3utr1 three_prime_UTR KR676532.1-CBFe-1.m1-3utr1:733..769+ NCBI Rosaceae gene and mRNA sequences
KR676532 region KR676532:1..769+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>KR676532.1-CBFe-1.m1 ID=KR676532.1-CBFe-1.m1; Name=CBFe-1; organism=Prunus mume; type=mRNA; length=717bp
atggacgtgtctgaactttccgactcggtcgaccagcccgagtcgagttc
tttgtccgacgccagcgtcacgactcgggggccttctttgtccgacgggg
aagtcatattggcgtcaagccggccgaagaagcgagccgggaggagggtt
ttcaaggagacgaggcacccggtttataggggtgtgaggaggaggaacaa
tgacaagtgggtttgtgaaatgagagagcccaacaagaagaagtccagga
tatggctcgggacttatccgacggctgagatggctgctcgtgcccatgac
gtggcggcattggcgtttagagggaagcatgcctgcctcaactttgctga
ctccgcgtggaggctgccagtgccggcttccatggatcccatggatattc
gaagggcggccgcggaggcagctgaggggtttaggccggaggagtttggt
ggagtgtgcaacggcagcagtgatgagaaggagagaatggtggtgcaggt
ggaagaggagaacaagaagggtagtgtgaacttggaaagaagcagaagct
tgagcttgtcctattgggatgaggaggaagcgtttgacatgcccaggttg
cttcatgacatggctgaagggcttcttctttctccaccgcaacccttagg
cagcgacacgaatttggatgacatgggtaccgatgctgatatcaaattgt
ggagtttctccatttaa
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protein sequence of CBFe-1

>KR676532.1-CBFe-1.p1 ID=KR676532.1-CBFe-1.p1; Name=CBFe-1; organism=Prunus mume; type=polypeptide; length=238bp
MDVSELSDSVDQPESSSLSDASVTTRGPSLSDGEVILASSRPKKRAGRRV
FKETRHPVYRGVRRRNNDKWVCEMREPNKKKSRIWLGTYPTAEMAARAHD
VAALAFRGKHACLNFADSAWRLPVPASMDPMDIRRAAAEAAEGFRPEEFG
GVCNGSSDEKERMVVQVEEENKKGSVNLERSRSLSLSYWDEEEAFDMPRL
LHDMAEGLLLSPPQPLGSDTNLDDMGTDADIKLWSFSI
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mRNA from alignment at KR676532:1..769+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KR676532.1-CBFe-1.m1 ID=KR676532.1-CBFe-1.m1; Name=CBFe-1; organism=Prunus mume; type=mRNA; length=769bp; location=Sequence derived from: KR676532:1..769+ (Prunus mume
atatagcttactctaatggacgtgtctgaactttccgactcggtcgacca
gcccgagtcgagttctttgtccgacgccagcgtcacgactcgggggcctt
ctttgtccgacggggaagtcatattggcgtcaagccggccgaagaagcga
gccgggaggagggttttcaaggagacgaggcacccggtttataggggtgt
gaggaggaggaacaatgacaagtgggtttgtgaaatgagagagcccaaca
agaagaagtccaggatatggctcgggacttatccgacggctgagatggct
gctcgtgcccatgacgtggcggcattggcgtttagagggaagcatgcctg
cctcaactttgctgactccgcgtggaggctgccagtgccggcttccatgg
atcccatggatattcgaagggcggccgcggaggcagctgaggggtttagg
ccggaggagtttggtggagtgtgcaacggcagcagtgatgagaaggagag
aatggtggtgcaggtggaagaggagaacaagaagggtagtgtgaacttgg
aaagaagcagaagcttgagcttgtcctattgggatgaggaggaagcgttt
gacatgcccaggttgcttcatgacatggctgaagggcttcttctttctcc
accgcaacccttaggcagcgacacgaatttggatgacatgggtaccgatg
ctgatatcaaattgtggagtttctccatttaatcatcgacgtttatttta
gtcgattattagaatttat
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Coding sequence (CDS) from alignment at KR676532:1..769+

>KR676532.1-CBFe-1.m1 ID=KR676532.1-CBFe-1.m1; Name=CBFe-1; organism=Prunus mume; type=CDS; length=717bp; location=Sequence derived from: KR676532:1..769+ (Prunus mume
atggacgtgtctgaactttccgactcggtcgaccagcccgagtcgagttc
tttgtccgacgccagcgtcacgactcgggggccttctttgtccgacgggg
aagtcatattggcgtcaagccggccgaagaagcgagccgggaggagggtt
ttcaaggagacgaggcacccggtttataggggtgtgaggaggaggaacaa
tgacaagtgggtttgtgaaatgagagagcccaacaagaagaagtccagga
tatggctcgggacttatccgacggctgagatggctgctcgtgcccatgac
gtggcggcattggcgtttagagggaagcatgcctgcctcaactttgctga
ctccgcgtggaggctgccagtgccggcttccatggatcccatggatattc
gaagggcggccgcggaggcagctgaggggtttaggccggaggagtttggt
ggagtgtgcaacggcagcagtgatgagaaggagagaatggtggtgcaggt
ggaagaggagaacaagaagggtagtgtgaacttggaaagaagcagaagct
tgagcttgtcctattgggatgaggaggaagcgtttgacatgcccaggttg
cttcatgacatggctgaagggcttcttctttctccaccgcaacccttagg
cagcgacacgaatttggatgacatgggtaccgatgctgatatcaaattgt
ggagtttctccatttaa
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