PG1, KR153990.1-PG1.m1 (mRNA) Prunus armeniaca

Transcript Overview
NamePG1
Unique NameKR153990.1-PG1.m1
TypemRNA
OrganismPrunus armeniaca (Apricot)
Sourcegenbank
Productpolygalacturonase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KR153990.1-PG1.m1-cds1KR153990.1-PG1.m1-cds1Prunus armeniacaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PG1KR153990.1-PG1.p1Prunus armeniacapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI932512163
nuccoreKR153990.1
Alignments
Feature NameTypeLocationAnalysis
KR153990 region KR153990:1..1182+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>KR153990.1-PG1.m1 ID=KR153990.1-PG1.m1; Name=PG1; organism=Prunus armeniaca; type=mRNA; length=1182bp
atggaaaaccgtagaagcctcttttctctctcacttatctttgtgttcat
gatcaactcagccatagccactccagtcacatacaatgtggccagtttag
gagccaaagcagatggcaagactgactccacaaaagccttcctctctgcc
tgggctaaagcttgtgcctcgatgaatcccagtgtcatttatgtgccggc
aggaacgttctttcttcgcgatgtggtgtttagtgggccttgcaagagca
atgccatcacctttcgcattgccggaacccttgtggccccgtctgattac
cgggtcatcggtaatgcagctaactggattttctttcaccatgtaaacgg
ggttaccatatcaggtggaattcttgacggccaaggcactgccttgtggg
cttgcaaggcctctcatggcgagagttgtcccagcggagcaacgacattg
agtttttcggactcaaacaacattgtggtgagtggattggcatccctaaa
cagccaaatgttccacatagtcatcaacgactgccaaaatgtgcaaatgc
aaggtgtcagggtttctgcttccggtaacagccctaacaccgatggcatt
catgtccaaatgtcatctggtgtcacaatcctcaactccaagattgcaac
cggtgacgattgtatctcaattggccccggaacctcaaatttgtggatag
aaagcgttgcctgtggacctggccatggaattagcattggaagtctaggc
aaggagcaagaagaggccggtgtacaaaatgtaacagttaaaacggttac
ctttactggtactcagaatggtctaagaatcaagtcatgggggaggccaa
gcactgggtttgctagaaatattcttttccaacatgctacaatggtcaat
gtcgaaaatcctattattatagatcaacattattgccccgacaacaaagg
gtgccctggtcaggtttctggagttcaaattagcgatgtgacatacgaag
acatacacggtacatcagcaacagaagttgcagtaaaatttgattgcagt
cccgagcacccttgtagcgagatcaaattggaggatgtgaagcttactta
caagaaccaagcagctgagtcttcatgtagccatgcagatggaacaactg
ggggtgtggttcagcctacaagttgtttgtag
back to top

protein sequence of PG1

>KR153990.1-PG1.p1 ID=KR153990.1-PG1.p1; Name=PG1; organism=Prunus armeniaca; type=polypeptide; length=393bp
MENRRSLFSLSLIFVFMINSAIATPVTYNVASLGAKADGKTDSTKAFLSA
WAKACASMNPSVIYVPAGTFFLRDVVFSGPCKSNAITFRIAGTLVAPSDY
RVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGESCPSGATTL
SFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGI
HVQMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLG
KEQEEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVN
VENPIIIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCS
PEHPCSEIKLEDVKLTYKNQAAESSCSHADGTTGGVVQPTSCL
back to top

mRNA from alignment at KR153990:1..1182+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KR153990.1-PG1.m1 ID=KR153990.1-PG1.m1; Name=PG1; organism=Prunus armeniaca; type=mRNA; length=1182bp; location=Sequence derived from: KR153990:1..1182+ (Prunus armeniaca
atggaaaaccgtagaagcctcttttctctctcacttatctttgtgttcat
gatcaactcagccatagccactccagtcacatacaatgtggccagtttag
gagccaaagcagatggcaagactgactccacaaaagccttcctctctgcc
tgggctaaagcttgtgcctcgatgaatcccagtgtcatttatgtgccggc
aggaacgttctttcttcgcgatgtggtgtttagtgggccttgcaagagca
atgccatcacctttcgcattgccggaacccttgtggccccgtctgattac
cgggtcatcggtaatgcagctaactggattttctttcaccatgtaaacgg
ggttaccatatcaggtggaattcttgacggccaaggcactgccttgtggg
cttgcaaggcctctcatggcgagagttgtcccagcggagcaacgacattg
agtttttcggactcaaacaacattgtggtgagtggattggcatccctaaa
cagccaaatgttccacatagtcatcaacgactgccaaaatgtgcaaatgc
aaggtgtcagggtttctgcttccggtaacagccctaacaccgatggcatt
catgtccaaatgtcatctggtgtcacaatcctcaactccaagattgcaac
cggtgacgattgtatctcaattggccccggaacctcaaatttgtggatag
aaagcgttgcctgtggacctggccatggaattagcattggaagtctaggc
aaggagcaagaagaggccggtgtacaaaatgtaacagttaaaacggttac
ctttactggtactcagaatggtctaagaatcaagtcatgggggaggccaa
gcactgggtttgctagaaatattcttttccaacatgctacaatggtcaat
gtcgaaaatcctattattatagatcaacattattgccccgacaacaaagg
gtgccctggtcaggtttctggagttcaaattagcgatgtgacatacgaag
acatacacggtacatcagcaacagaagttgcagtaaaatttgattgcagt
cccgagcacccttgtagcgagatcaaattggaggatgtgaagcttactta
caagaaccaagcagctgagtcttcatgtagccatgcagatggaacaactg
ggggtgtggttcagcctacaagttgtttgtag
back to top

Coding sequence (CDS) from alignment at KR153990:1..1182+

>KR153990.1-PG1.m1 ID=KR153990.1-PG1.m1; Name=PG1; organism=Prunus armeniaca; type=CDS; length=1182bp; location=Sequence derived from: KR153990:1..1182+ (Prunus armeniaca
atggaaaaccgtagaagcctcttttctctctcacttatctttgtgttcat
gatcaactcagccatagccactccagtcacatacaatgtggccagtttag
gagccaaagcagatggcaagactgactccacaaaagccttcctctctgcc
tgggctaaagcttgtgcctcgatgaatcccagtgtcatttatgtgccggc
aggaacgttctttcttcgcgatgtggtgtttagtgggccttgcaagagca
atgccatcacctttcgcattgccggaacccttgtggccccgtctgattac
cgggtcatcggtaatgcagctaactggattttctttcaccatgtaaacgg
ggttaccatatcaggtggaattcttgacggccaaggcactgccttgtggg
cttgcaaggcctctcatggcgagagttgtcccagcggagcaacgacattg
agtttttcggactcaaacaacattgtggtgagtggattggcatccctaaa
cagccaaatgttccacatagtcatcaacgactgccaaaatgtgcaaatgc
aaggtgtcagggtttctgcttccggtaacagccctaacaccgatggcatt
catgtccaaatgtcatctggtgtcacaatcctcaactccaagattgcaac
cggtgacgattgtatctcaattggccccggaacctcaaatttgtggatag
aaagcgttgcctgtggacctggccatggaattagcattggaagtctaggc
aaggagcaagaagaggccggtgtacaaaatgtaacagttaaaacggttac
ctttactggtactcagaatggtctaagaatcaagtcatgggggaggccaa
gcactgggtttgctagaaatattcttttccaacatgctacaatggtcaat
gtcgaaaatcctattattatagatcaacattattgccccgacaacaaagg
gtgccctggtcaggtttctggagttcaaattagcgatgtgacatacgaag
acatacacggtacatcagcaacagaagttgcagtaaaatttgattgcagt
cccgagcacccttgtagcgagatcaaattggaggatgtgaagcttactta
caagaaccaagcagctgagtcttcatgtagccatgcagatggaacaactg
ggggtgtggttcagcctacaagttgtttgtag
back to top