EPSPS, KU310909.1-EPSPS.m1 (mRNA) Fragaria x ananassa

Transcript Overview
NameEPSPS
Unique NameKU310909.1-EPSPS.m1
TypemRNA
OrganismFragaria x ananassa (Strawberry)
Sourcegenbank
Product3-phosphoshikimate 1-carboxyvinyltransferase
Genbank NoteEPSP synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KU310909.1-EPSPS.m1-cds1KU310909.1-EPSPS.m1-cds1Fragaria x ananassaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
EPSPSKU310909.1-EPSPS.p1Fragaria x ananassapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
nuccoreKU310909.1
Alignments
Feature NameTypeLocationAnalysis
KU310909 region KU310909:1..1563+ NCBI Rosaceae gene and mRNA sequences
Sequences
The following sequences are available for this feature:

mRNA sequence

>KU310909.1-EPSPS.m1 ID=KU310909.1-EPSPS.m1; Name=EPSPS; organism=Fragaria x ananassa; type=mRNA; length=1563bp
atggcccaagtgagcaaaatctgcagcaatggagctcaaagcttcaatct
tttgcccaatgtctccaaaccccagatacccagatctttgaactcaatct
ccttgaagtcacagtttttgggttcttcgaattctctgagtttgaagagg
gaaagtgggtttgtgggtagagtcagggctggtgggcttagagtttcggc
ttcggttgttacggctgagaagccgtcgacggtgccggagattgtgttgc
aacccatcaaggaaatttcgggtaccattactttgccgggttctaagtct
ttgtctaatcggattctgcttattgctgctctttctgagggaacgactgt
tgtagacaacttactagatagtgatgatatcaattatatgcttggtgcgt
tgaaaacacttgggctgaatgtggaagatgacaaggcaaacaaaagagct
gttgtggagggttgtggcggtcagtttcctttggggaatgaatccggaga
ggaagttcaacttttccttggaaatgctggaacagcaatgaggccgttga
ctgctgcagtaactgctgctggtggacattctaggtatgtacttgatggg
gtgccccgaatgagggagagaccaattggagacttggtcactggtcttaa
gcagcttggtgcagatgttgactgttttctaggaacagactgtcctcctg
ttcgtgtaattggaaagggaggccttccagggggcaaggtgaagctctct
ggatcaatcagtagccaatatttgacttctttgcttatggcagctccttt
ggctctgggagatgttgaagttgagattattgataagctgatttccattc
cttacgttgaaatgacattgaaattgatggaacgctttggggtcacagtg
gaacatagtgatagctgggatcggtttttggttcgaggaggtcaaaagta
caagtctcctggaaaagcctttgtcgaaggtgatgcttcaagtgctagtt
acttcctagctggtgctgctgtaacgggtgggatggtaactgttgaaggc
tgtggcacaagcagtttacagggagatgtaaaatttgctgcagttcttga
aaagatgggcgctgaagttacatggacagagaatagtgtcaccgtcacag
gacctcaaaaacattcttctggaagaaagcacttgaaagctgttgatgta
aacatgaacaagatgccagatgttgccatgactcttgctgtagttgctct
tttcgctgatggtccaactgccataagagatgtggcaagctggagagtga
aggagacagaaaggatgattgccatttgcaccgaactcaggaagttggga
gcaacagttgaagaaggcccagattattgtataatcacaccaccggaaaa
gctaaatgtaacggccatagacacatacgatgaccacagaatggccatgg
cattctccctggccgcctgcggagatgttcccgttaccatcaatgatcct
ggttgcaccagaaaaacattccccaactactttgaagtccttgggaagtt
tacaaaacattaa
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protein sequence of EPSPS

>KU310909.1-EPSPS.p1 ID=KU310909.1-EPSPS.p1; Name=EPSPS; organism=Fragaria x ananassa; type=polypeptide; length=520bp
MAQVSKICSNGAQSFNLLPNVSKPQIPRSLNSISLKSQFLGSSNSLSLKR
ESGFVGRVRAGGLRVSASVVTAEKPSTVPEIVLQPIKEISGTITLPGSKS
LSNRILLIAALSEGTTVVDNLLDSDDINYMLGALKTLGLNVEDDKANKRA
VVEGCGGQFPLGNESGEEVQLFLGNAGTAMRPLTAAVTAAGGHSRYVLDG
VPRMRERPIGDLVTGLKQLGADVDCFLGTDCPPVRVIGKGGLPGGKVKLS
GSISSQYLTSLLMAAPLALGDVEVEIIDKLISIPYVEMTLKLMERFGVTV
EHSDSWDRFLVRGGQKYKSPGKAFVEGDASSASYFLAGAAVTGGMVTVEG
CGTSSLQGDVKFAAVLEKMGAEVTWTENSVTVTGPQKHSSGRKHLKAVDV
NMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLG
ATVEEGPDYCIITPPEKLNVTAIDTYDDHRMAMAFSLAACGDVPVTINDP
GCTRKTFPNYFEVLGKFTKH
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mRNA from alignment at KU310909:1..1563+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KU310909.1-EPSPS.m1 ID=KU310909.1-EPSPS.m1; Name=EPSPS; organism=Fragaria x ananassa; type=mRNA; length=1563bp; location=Sequence derived from: KU310909:1..1563+ (Fragaria x ananassa
atggcccaagtgagcaaaatctgcagcaatggagctcaaagcttcaatct
tttgcccaatgtctccaaaccccagatacccagatctttgaactcaatct
ccttgaagtcacagtttttgggttcttcgaattctctgagtttgaagagg
gaaagtgggtttgtgggtagagtcagggctggtgggcttagagtttcggc
ttcggttgttacggctgagaagccgtcgacggtgccggagattgtgttgc
aacccatcaaggaaatttcgggtaccattactttgccgggttctaagtct
ttgtctaatcggattctgcttattgctgctctttctgagggaacgactgt
tgtagacaacttactagatagtgatgatatcaattatatgcttggtgcgt
tgaaaacacttgggctgaatgtggaagatgacaaggcaaacaaaagagct
gttgtggagggttgtggcggtcagtttcctttggggaatgaatccggaga
ggaagttcaacttttccttggaaatgctggaacagcaatgaggccgttga
ctgctgcagtaactgctgctggtggacattctaggtatgtacttgatggg
gtgccccgaatgagggagagaccaattggagacttggtcactggtcttaa
gcagcttggtgcagatgttgactgttttctaggaacagactgtcctcctg
ttcgtgtaattggaaagggaggccttccagggggcaaggtgaagctctct
ggatcaatcagtagccaatatttgacttctttgcttatggcagctccttt
ggctctgggagatgttgaagttgagattattgataagctgatttccattc
cttacgttgaaatgacattgaaattgatggaacgctttggggtcacagtg
gaacatagtgatagctgggatcggtttttggttcgaggaggtcaaaagta
caagtctcctggaaaagcctttgtcgaaggtgatgcttcaagtgctagtt
acttcctagctggtgctgctgtaacgggtgggatggtaactgttgaaggc
tgtggcacaagcagtttacagggagatgtaaaatttgctgcagttcttga
aaagatgggcgctgaagttacatggacagagaatagtgtcaccgtcacag
gacctcaaaaacattcttctggaagaaagcacttgaaagctgttgatgta
aacatgaacaagatgccagatgttgccatgactcttgctgtagttgctct
tttcgctgatggtccaactgccataagagatgtggcaagctggagagtga
aggagacagaaaggatgattgccatttgcaccgaactcaggaagttggga
gcaacagttgaagaaggcccagattattgtataatcacaccaccggaaaa
gctaaatgtaacggccatagacacatacgatgaccacagaatggccatgg
cattctccctggccgcctgcggagatgttcccgttaccatcaatgatcct
ggttgcaccagaaaaacattccccaactactttgaagtccttgggaagtt
tacaaaacattaa
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Coding sequence (CDS) from alignment at KU310909:1..1563+

>KU310909.1-EPSPS.m1 ID=KU310909.1-EPSPS.m1; Name=EPSPS; organism=Fragaria x ananassa; type=CDS; length=1563bp; location=Sequence derived from: KU310909:1..1563+ (Fragaria x ananassa
atggcccaagtgagcaaaatctgcagcaatggagctcaaagcttcaatct
tttgcccaatgtctccaaaccccagatacccagatctttgaactcaatct
ccttgaagtcacagtttttgggttcttcgaattctctgagtttgaagagg
gaaagtgggtttgtgggtagagtcagggctggtgggcttagagtttcggc
ttcggttgttacggctgagaagccgtcgacggtgccggagattgtgttgc
aacccatcaaggaaatttcgggtaccattactttgccgggttctaagtct
ttgtctaatcggattctgcttattgctgctctttctgagggaacgactgt
tgtagacaacttactagatagtgatgatatcaattatatgcttggtgcgt
tgaaaacacttgggctgaatgtggaagatgacaaggcaaacaaaagagct
gttgtggagggttgtggcggtcagtttcctttggggaatgaatccggaga
ggaagttcaacttttccttggaaatgctggaacagcaatgaggccgttga
ctgctgcagtaactgctgctggtggacattctaggtatgtacttgatggg
gtgccccgaatgagggagagaccaattggagacttggtcactggtcttaa
gcagcttggtgcagatgttgactgttttctaggaacagactgtcctcctg
ttcgtgtaattggaaagggaggccttccagggggcaaggtgaagctctct
ggatcaatcagtagccaatatttgacttctttgcttatggcagctccttt
ggctctgggagatgttgaagttgagattattgataagctgatttccattc
cttacgttgaaatgacattgaaattgatggaacgctttggggtcacagtg
gaacatagtgatagctgggatcggtttttggttcgaggaggtcaaaagta
caagtctcctggaaaagcctttgtcgaaggtgatgcttcaagtgctagtt
acttcctagctggtgctgctgtaacgggtgggatggtaactgttgaaggc
tgtggcacaagcagtttacagggagatgtaaaatttgctgcagttcttga
aaagatgggcgctgaagttacatggacagagaatagtgtcaccgtcacag
gacctcaaaaacattcttctggaagaaagcacttgaaagctgttgatgta
aacatgaacaagatgccagatgttgccatgactcttgctgtagttgctct
tttcgctgatggtccaactgccataagagatgtggcaagctggagagtga
aggagacagaaaggatgattgccatttgcaccgaactcaggaagttggga
gcaacagttgaagaaggcccagattattgtataatcacaccaccggaaaa
gctaaatgtaacggccatagacacatacgatgaccacagaatggccatgg
cattctccctggccgcctgcggagatgttcccgttaccatcaatgatcct
ggttgcaccagaaaaacattccccaactactttgaagtccttgggaagtt
tacaaaacattaa
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