COL1, COL1 (gene) Malus x domestica

Gene Overview


Name	COL1
Unique Name	COL1
Type	gene
Organism	Malus x domestica (Apple)
Source	tripal_genbank_parser_generic_gene

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GDR Gene Database	2021-06-03

Associated Genes

Associated Genes/Sequences

The following feature(s) are associated with this gene:

Type	Gene/mRNA Name	Genome Location	NCBI Accession
predicted genes from whole genome assembly	EU672878.1-COL1	Chr15:3077703..3078981 chr1:26862616..26863894 chr1:33358014..33359292	EU672878.1
predicted genes from whole genome assembly	HM122525.1-COL1.m1	Chr08:3877558..3878633 unanchored:66464515..66465590 unanchored:66464233..66465308 chr11:33378346..33379421	HM122525.1
predicted genes from whole genome assembly	AF052584.1-COL1.m1	Chr15:3077786..3078898 chr1:26862699..26863811 chr1:33358097..33359209	AF052584.1
predicted genes from whole genome assembly	EU672878.1-COL1.m1	Chr15:3077786..3078898 chr1:26862699..26863811 chr1:33358097..33359209	EU672878.1

Sequence(s):

>EU672878.1-COL11278
gagagagagtactcgtgcgtgagtgagcgagtgagagcttttcaatatttacgaaaattattacactgcagcagatttcg
gttatggcgttgaagctttgcgactcgtgcaaatcggcgacagggactctgttctgccgcgctgactccgccttcctctg
cgtcaattgcgactccaagatccatgcggccaacaaactcgcctcccgccacgcccgcgtctggctctgcgaggtgtgtg
agcaagctccagctcacgtcacatgcaaggccgacgacgccgccctctgcgtcacctgcgaccgcgacatccactccgcc
aaccctcttagccgacgccacgagcgagtcccagtcacgcccttctacgactcggtgaactcggccaccgattccgtccc
cgctgtcaaatccgctgttaacttcctcaacgaccgttacttctccgacgttgacggagagatcgaggcgaggagggagg
aggccgaggccgcctcgtggctgctcccgaaccccaaggcgatggagaatccggatctgaactcggggcagtacttgttc
ccggaaatggatccgtatatggatctggactacgggcatgtggatccgaagcttgaagatgctcaggagcagaacagctg
catcacggacggcgtcgttccggagcaaagcaagaacatgcagcctcagctcgtcaacgaccacagcttcgaaatcgact
tctccgccgcctccaagcccttcgtctacggctaccaccacgctcagtgtctgagacagagtgtaagccctctcaatttt
ctcagtaaccagacagatccgaagaaaattttgcattcattcagtctctgatcccctgctttgaaccacaggtttcatcg
tcctcgatggacgtcagcatcgtgccagatgacaacgcgatgacagacgattcaaatccttacaacaagtcaatgacctc
cgccgtcgagtcatcacatccggcggtccagctctcctccgcagatcgcgaggcgagggtgctgaggtacagagagaagc
ggaagaaccgaaagttcgagaagacgatacggtacgcttcgagaaaagcgtacgcggagacccgcccgcgaatcaaaggc
aggttcgcgaagcgcacggaggtggagatcgaagcggagccgatgtgccgctacggcatcgttccgtcgttttaggttaa
tgatgtaattaaccggtaatcaagctttgtaatttcgctttttgtgtaaatattggccgtcgattttgtacaactttg

>HM122525.1-COL1.m1990
atggcatcgaagctctgcgactcttgccaatcggcgacggcgactctgttctgccgcgccgactccgccttcctctgcgt
caactgcgactccaagatccacgcggccaacaagctcgcctcccgccacccccgtgtctggctctgcgaggtctgcgagc
aagctccagctcacgtcacctgcaaggccgacgacgccgccctctgcgtcacctgtgaccgcgacatccactccgccaac
cctctcagcagtcgccacgatcgagtccctgtcacgccgttttacgattccgtgaactcggctgcaaactcggtccccgt
cgtcaaatctgtcgtcaacttcctcgacgaccgttacttgtccgacgtggacggagagaccgaggtgagcagggaggagg
ccgaggccgcctcgtggctgctcccgaaccccaaggcgatggagaatccagatctgaactcggggcagtacttgtttcag
gaaatggatccgtatctggatctggactacgggcatgtggatccgaaacttgaagaagctcaggagcagaacagctgcgg
cgcggacggcgtcgttccggtgcagagcaagaacatgcagcctctgctggttaacgaccagagcttcgaactcgacttct
ccgccggctccaagcccttcgtctacggctaccaccacgctcggtgtctgagccagagtgtatcatcgtcgtcgatggac
atcagcgtcgtgccggatggcaacgcggtgaccgctgctgtggagacatcgcaaccggcggtccagctctcgtccgtgga
tcgcgtggcgagggtgctgaggtacagagagaagcggaagaaccgaaagttcgagaagacgatacggtacgcttcgagaa
aagcgtacgcggaaactcggccgcgaatcaaaggcaggttcgcgaagcgcacggaggtggagatcgaagccgagaggatg
tgccgctacggcgtcgttccgtcgttttag

>AF052584.1-COL1.m11023
atggcgttgaagctttgcgactcgtgcaaatcggcgacagggactctgttctgccgcgctgactccgccttcctctgcgt
caattgcgactccaagatccatgcggccaacaaactcgcctcccgccacgcccgcgtctggctctgcgaggtgtgtgagc
aagctccagctcacgtcacatgcaaggccgacgacgccgccctctgcgtcacctgcgaccgcgacatccactccgccaac
cctcttagccacgccgacgagcgagtcccagtcacgcccttctacgactcggtgaactcggccaccgattccgtccccgc
tgtcaaatccgctgttaacttcctcaacgaccgttacttctccgacgttgacggagagatcgaggcgaggagggaggagg
ccgaggccgcctcgtggctgctcccgaaccccaaggcgatggagaatccggatctgaactcggggcagtacttgttcccg
gaaatggatccgtatatggatctggactacgggcatgtggatccgaagcttgaagatgctcaggagcagaacagctgcat
cacggacggcgtcgttccggagcaaagcaagaacatgcagcctcagctcgtcaacgaccacagcttcgaaatcgacttct
ccgccgcctccaagcccttcgtctacggctaccaccacgctcagtgtctgagacagagtgtttcatcgtcctcgatggac
gtcagcatcgtgccagatgacaacgcgatgacagacgattcaaatccttacaacaagtcaatgacctccgccgtcgagtc
atcacatccggcggtccagctctcctccgcagatcgcgaggcgagggtgctgaggtacagagagaagcggaagaaccgaa
agttcgagaagacgatacggtacgcttcgagaaaagcgtacgcggagacccgcccgcgaatcaaaggcaggttcgcgaag
cgcacggaggtggagatcgaagcggagccgatgtgccgctacggcatcgttccgtcgttttag

>EU672878.1-COL1.m11023
atggcgttgaagctttgcgactcgtgcaaatcggcgacagggactctgttctgccgcgctgactccgccttcctctgcgt
caattgcgactccaagatccatgcggccaacaaactcgcctcccgccacgcccgcgtctggctctgcgaggtgtgtgagc
aagctccagctcacgtcacatgcaaggccgacgacgccgccctctgcgtcacctgcgaccgcgacatccactccgccaac
cctcttagccgacgccacgagcgagtcccagtcacgcccttctacgactcggtgaactcggccaccgattccgtccccgc
tgtcaaatccgctgttaacttcctcaacgaccgttacttctccgacgttgacggagagatcgaggcgaggagggaggagg
ccgaggccgcctcgtggctgctcccgaaccccaaggcgatggagaatccggatctgaactcggggcagtacttgttcccg
gaaatggatccgtatatggatctggactacgggcatgtggatccgaagcttgaagatgctcaggagcagaacagctgcat
cacggacggcgtcgttccggagcaaagcaagaacatgcagcctcagctcgtcaacgaccacagcttcgaaatcgacttct
ccgccgcctccaagcccttcgtctacggctaccaccacgctcagtgtctgagacagagtgtttcatcgtcctcgatggac
gtcagcatcgtgccagatgacaacgcgatgacagacgattcaaatccttacaacaagtcaatgacctccgccgtcgagtc
atcacatccggcggtccagctctcctccgcagatcgcgaggcgagggtgctgaggtacagagagaagcggaagaaccgaa
agttcgagaagacgatacggtacgcttcgagaaaagcgtacgcggagacccgcccgcgaatcaaaggcaggttcgcgaag
cgcacggaggtggagatcgaagcggagccgatgtgccgctacggcatcgttccgtcgttttag