CO753161, CO753161 (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	CO753161
Genbank ID	N/A
Type	SSR
Species	Malus x domestica
Repeat Motif	(TC)10
Primer 1	CO753161.forward primer: ATTGCCTTGGCTATCCACAC
Primer 2	CO753161.reverse primer: CGACCTTGAGGCCTCTGTAG
Max Length	766
Publication	[view all]
Contact	Schuyler Korban

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publications


Year	Publication
2012	Antanaviciute L, Fernández-Fernández F, Jansen J, Banchi E, Evans KM, Viola R, Velasco R, Dunwell JM, Troggio M, Sargent DJ. Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array. BMC genomics. 2012; 13:203.
2009	Gasic K, Han Y, Kertbundit S, Shulaev V, Iezzoni AF, Stover EW, Bell RL, Wisniewski ME, Korban SS. Characteristics and transferability of new apple EST-derived SSRs to other Rosaceae species. Molecular Breeding. 2009; 23(3):397-411.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-C16xC17-F1-2012	11	N/A	72.7	CO753161	View
2	Apple-MM-F1	11	N/A	58.9	CO753161	View
3	Apple-M432-2012	LG11	N/A	66	CO753161	View
4	Pear-BD-F1-2015	LG11	N/A	76.4	CO753161	View
5	Pear-Bayuehong-F1-2015	LG11	N/A	74.78	CO753161	View
6	Pear-Dangshansuli-F1-2015	LG11	N/A	84.65	CO753161	View
7	Pear-integrated_consensus_map-IPCG-2017	LG11	N/A	102.54	CO753161	View

Alignments

Feature Name	Type	Location	Analysis
Chr11	chromosome	Chr11:35559843..35560124.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr11A	chromosome	chr11A:34012548..34012846.	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation