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Marker Overview
| Name | SNP_FB_0789989 |
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| dbSNP ID | . |
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| SNP Array ID | | 480K SNP array for apple: | AX-115198918 | | 20K SNP array for apple: | SNP_FB_0789989 |
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| Type | SNP |
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| SNP Alleles | A/C |
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| Probe 1 | SNP_FB_0789989.probe: CTCTCATCCCTTTAGCATTTCTTATTCTAAAACGACCTGGTTCCATATTA |
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| 5' Flanking Sequence | AATCATGTAAACCAATTATGGAAGNAANATTGAGCCTTACCCTCTCTAGGTGCACAAACA |
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| 3' Flanking Sequence | TAATATGGAACCAGGTCGTTTTAGAATAAGAAATGCTAAAGGGATGAGAGAGTCCGTMAA |
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| Species | Malus x domestica |
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| Publication | [view all] |
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| Contact | Michela Troggio
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2014 | Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377. |
| 2016 | Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26. |
Sequence
>SNP_FB_0789989 ID=SNP_FB_0789989; Name=SNP_FB_0789989; organism=Malus x domestica; type=genetic_marker; length=72bp
ATTGAGCCTTACCCTCTCTAGGTGCACAAACA[G/T]TAATATGGAACCA
GGTCGTTTTAGAATAAGAAATG
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