CGPAA1580, CGPAA1580 (genetic_marker) Prunus persica | GDR

Marker Overview

Marker Overview


Name	CGPAA1580
Genbank ID	CV051580
Type	candidate gene marker
Species	Prunus persica
Primer 1	CGPAA1580.forward primer: TTGCGCGTGAACTACTATCCT
Primer 2	CGPAA1580.revers primer: TTGCCCTTAAGTTTCCCCTT
Product Length	578
Publication	[view all]
Contact	Ignazio Verde
Comment	Dioxygenase;Dox

Contact

Name

Details

Ignazio Verde

First name:	Ignazio
Last name:	Verde
Title:	researcher
Institution:	Istituto Sperimentale per la Frutticoltura (CRA)
Address:	Via di Fioranello 52, Ciampino Aeroporto, 00040 Rome, Italy
Country:	Italy
Email:	ignazio.verde@entecra.it
Phone:	(+39) 0679348183
Fax:	(+39) 0679341630
Keywords:	Peach

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Pp06	chromosome	Pp06:25035545..25036121 .	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	GDR marker alignment to genome using primer sequences

Publications


Year	Publication
2017	Verde I, Jenkins J, Dondini L, Micali S, Pagliarani G, Vendramin E, Paris R, Aramini V, Gazza L, Rossini L, Bassi D, Troggio M, Shu S, Grimwood J, Tartarini S, Dettori MT, Schmutz J. The Peach v2.0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity. BMC genomics. 2017 Mar 11; 18(1):225.
2011	Mol Breed. 2011. 28(4):667682

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Prunus-TxE-peachV2.0	LG6	N/A	58.9	CGPAA1580	View