AX-89812241, AX-89812241 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812241
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809815
TypeSNP
SNP AllelesT/G
Probe 1AX-89812241.AX-89812241: TCCGTCTGTAGAAACCTATAGAGAAATCCC
5' Flanking SequenceCCAGTAGGCAGACATCTTTGGATATCTCTTTAGGG
3' Flanking SequenceGGTGAAGTCAACATAGACTATGCCAAACCTTGAAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812241 ID=AX-89812241; Name=AX-89812241; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCAGTAGGCAGACATCTTTGGATATCTCTTTAGGGKGGTGAAGTCAACAT
AGACTATGCCAAACCTTGAAG
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:9883316..9883386+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:9879221..9879291+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:27480761..27480831- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:19424034..19424104- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-4 chromosome Fvb5-4:7602844..7602914+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:7587855..7587925+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:9636396..9636465+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:9630945..9631015+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:10486697..10486767+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:10481883..10481953+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:29614553..29614630- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:18427394..18427464- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:18432561..18432631- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:1387564..1387564. Fragaria vesca Whole Genome v1.1 Assembly & Annotation