AX-89869441, AX-89869441 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869441
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811746
TypeSNP
SNP AllelesA/G
Probe 1AX-89869441.AX-89869441: ATTTACCATAGTCCAAATGAGTGTTTGAGG
5' Flanking SequenceATTGCTTCTGATAACTTGAAATAATTGTATTTTCA
3' Flanking SequenceGGAGTTTGTGAGTAAACCTGATACCATTTAAAGGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869441 ID=AX-89869441; Name=AX-89869441; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTGCTTCTGATAACTTGAAATAATTGTATTTTCARGGAGTTTGTGAGTA
AACCTGATACCATTTAAAGGA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:3599676..3599746+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:3649681..3649751- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-4 chromosome Fvb3-4:25958965..25959035+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:315244..315314+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:28591421..28591491+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:2931231..2931301+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:1862162..1862232- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:2384205..2384275- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:24510326..24510396- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:4584794..4584794. Fragaria vesca Whole Genome v1.1 Assembly & Annotation