AX-89812443, AX-89812443 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812443
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812311
TypeSNP
SNP AllelesA/G
Probe 1AX-89812443.AX-89812443: TTAAAGAGCGAGAGGAGTTAATTTACACTA
5' Flanking SequenceCTAGGAATTTCTCGCTCTCCTCAATTAAATGTGAT
3' Flanking SequenceGGACTGTACCATCAGGGAGTTCAGCATAGAAGAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812443 ID=AX-89812443; Name=AX-89812443; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTAGGAATTTCTCGCTCTCCTCAATTAAATGTGATRGGACTGTACCATCA
GGGAGTTCAGCATAGAAGAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:3963565..3963635+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3261589..3261659+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:3534463..3534532+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:5554826..5554896+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:2086941..2087011- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:24218605..24218674- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:5548390..5548390. Fragaria vesca Whole Genome v1.1 Assembly & Annotation