AX-89812456, AX-89812456 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812456
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812617
TypeSNP
SNP AllelesA/G
Probe 1AX-89812456.AX-89812456: ATCCGAAACGGTGACCATCCCTGCTTAGTC
5' Flanking SequenceATTAGTAGGCTTTGCCACTGGTAGGGACGAATCAG
3' Flanking SequenceGGGATAATGGACAACACCGAAGCAGATAAGATACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812456 ID=AX-89812456; Name=AX-89812456; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTAGTAGGCTTTGCCACTGGTAGGGACGAATCAGRGGGATAATGGACAA
CACCGAAGCAGATAAGATACC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4416994..4417064+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3690896..3690966+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4022332..4022402+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:5958546..5958616+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:615737..615807- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23764008..23764078- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6001819..6001819. Fragaria vesca Whole Genome v1.1 Assembly & Annotation