AX-89812470, AX-89812470 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812470
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812928
TypeSNP
SNP AllelesA/G
Probe 1AX-89812470.AX-89812470: GTTCCAACTTCCTTCCATCAGTATAATTGG
5' Flanking SequenceTGGTACAAGGTTGAAGGAAGGTAGTCATATTAACC
3' Flanking SequenceCAGCTTGCTAACACTCACAACAGTTATCAGGAAGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812470 ID=AX-89812470; Name=AX-89812470; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGGTACAAGGTTGAAGGAAGGTAGTCATATTAACCRCAGCTTGCTAACAC
TCACAACAGTTATCAGGAAGC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4962896..4962966+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4211330..4211400+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6501803..6501873+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23142951..23143021+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:5120471..5120541- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:166448..166518- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23337655..23337725- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6547721..6547721. Fragaria vesca Whole Genome v1.1 Assembly & Annotation