AX-89812304, AX-89812304 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812304
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817557
TypeSNP
SNP AllelesA/G
Probe 1AX-89812304.AX-89812304: CACGGCCCAAAGATGGGCAAAAAGTTACGG
5' Flanking SequenceCGGTGGTGCCGGGTTTCTACCCGTTTTTCAATGCC
3' Flanking SequenceTAACGGGGCTAAACGGGTCGGGTAAGTCCAACATC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb7chromosomeFvb7:20812369..20812439 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:20547959..20548028 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:19136056..19136125 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:18624171..18624241 +Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:20013978..20014047 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:20139823..20139892 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7chromosomeFvb7:19994415..19994482 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb7-2chromosomeFvb7-2:24983230..24983299 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:30467764..30467833 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:26413885..26413954 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:26835414..26835483 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-1chromosomeFvb7-1:28025780..28025849 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-4chromosomeFvb7-4:4063377..4063447 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-3chromosomeFvb7-3:4417964..4418033 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-3chromosomeFvb7-3:4351517..4351586 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:26288776..26288844 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb7-2chromosomeFvb7-2:26477682..26477751 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG1chromosomeLG1:16642831..16642831 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89812304 ID=AX-89812304; Name=AX-89812304; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CGGTGGTGCCGGGTTTCTACCCGTTTTTCAATGCCRTAACGGGGCTAAAC
GGGTCGGGTAAGTCCAACATC