AX-89812363, AX-89812363 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812363
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88818848
TypeSNP
SNP AllelesT/G
Probe 1AX-89812363.AX-89812363: CGAAGGACTTGACGGACACTATTCTTGAAC
5' Flanking SequenceTATAAGCTTCCTGAACTGCCTGTGATAAGAACTTG
3' Flanking SequenceGGTCTCTATCCTGTACAACTGGTTGGAGAATGAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812363 ID=AX-89812363; Name=AX-89812363; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TATAAGCTTCCTGAACTGCCTGTGATAAGAACTTGKGGTCTCTATCCTGT
ACAACTGGTTGGAGAATGAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:1971790..1971860- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:39176139..39176209+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:25470389..25470459+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:34094489..34094559+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:3869427..3869497- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:40900270..40900340- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:19529263..19529263. Fragaria vesca Whole Genome v1.1 Assembly & Annotation