AX-89869379, AX-89869379 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869379
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88819183
TypeSNP
SNP AllelesA/C
Probe 1AX-89869379.AX-89869379: CCCCATATGGTTTACTTCGACGATCCTAGG
5' Flanking SequenceGGTCATCATCATCTGTATTTTGTGACGCTTGAACA
3' Flanking SequenceGGATCCTAGCAGCTTCATTTGGTATACCCCTTGTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869379 ID=AX-89869379; Name=AX-89869379; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGTCATCATCATCTGTATTTTGTGACGCTTGAACAMGGATCCTAGCAGCT
TCATTTGGTATACCCCTTGTT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:17885886..17885956+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:17279647..17279717- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:20241588..20241658- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:20884699..20884769- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:8650111..8650181- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:20198326..20198326. Fragaria vesca Whole Genome v1.1 Assembly & Annotation