AX-89812730, AX-89812730 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812730
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820367
TypeSNP
SNP AllelesA/G
Probe 1AX-89812730.AX-89812730: TCCTAAGTTTTTGTACAGGAATGAAAGTGG
5' Flanking SequenceACCCGAGGATTCAAAAACATGTCCTTACTTTCACC
3' Flanking SequenceGCTTGAAGCCTTGTACAGAAACAAGAACAACAACA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812730 ID=AX-89812730; Name=AX-89812730; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACCCGAGGATTCAAAAACATGTCCTTACTTTCACCRGCTTGAAGCCTTGT
ACAGAAACAAGAACAACAACA
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:4504899..4504969+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:9986422..9986492+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:8042566..8042636+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:13512024..13512094- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:12631665..12631735- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:2087852..2087852. Fragaria vesca Whole Genome v1.1 Assembly & Annotation