AX-89812771, AX-89812771 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812771
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820434
TypeSNP
SNP AllelesA/C
Probe 1AX-89812771.AX-89812771: ATTTCTCCCACTTCTATTAGAAGCGAGAGG
5' Flanking SequenceGCCTCTAAAGAGGGTGAAGATAATCTTCGCTCTCC
3' Flanking SequenceATTTGCTGCATTATGGGCCATGTTGATACTGGTAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812771 ID=AX-89812771; Name=AX-89812771; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCCTCTAAAGAGGGTGAAGATAATCTTCGCTCTCCMATTTGCTGCATTAT
GGGCCATGTTGATACTGGTAA
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:4674600..4674670+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:10180533..10180603+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:8201072..8201142+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:21545741..21545811- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:13289161..13289231- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:12416781..12416851- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:2257553..2257553. Fragaria vesca Whole Genome v1.1 Assembly & Annotation