AX-89869777, AX-89869777 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869777
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820503
TypeSNP
SNP AllelesA/G
Probe 1AX-89869777.AX-89869777: TTGGAATGTCTTTTAATTAACGTCCGATGG
5' Flanking SequenceACTGCTTGTTGAGAGTTGAAGCGTTTATAGAGTAC
3' Flanking SequenceGGTAGCCTGCAATTAATTTTCTGTAAGGTTTAGTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869777 ID=AX-89869777; Name=AX-89869777; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACTGCTTGTTGAGAGTTGAAGCGTTTATAGAGTACRGGTAGCCTGCAATT
AATTTTCTGTAAGGTTTAGTA
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:22918365..22918435+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-3 chromosome Fvb2-3:757307..757745+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:2177300..2177370+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-4 chromosome Fvb2-4:21340465..21340535- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:20043706..20043776- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:2365013..2365013. Fragaria vesca Whole Genome v1.1 Assembly & Annotation