AX-89869797, AX-89869797 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869797
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820607
TypeSNP
SNP AllelesT/G
Probe 1AX-89869797.AX-89869797: AGGCATATATTATCACAACTATAAGTTTTG
5' Flanking SequenceGTCTGCCTCAACATTTTAAGAGAAGACTGGAAACC
3' Flanking SequenceGTTTTGAATATCAACACTATTATATACGGACTCTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869797 ID=AX-89869797; Name=AX-89869797; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTCTGCCTCAACATTTTAAGAGAAGACTGGAAACCKGTTTTGAATATCAA
CACTATTATATACGGACTCTT
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:19530287..19530357+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:6768386..6768456+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:5560148..5560218+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:4110600..4110670+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:17416660..17416730- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:17110393..17110463- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:2743055..2743055. Fragaria vesca Whole Genome v1.1 Assembly & Annotation