AX-89812813, AX-89812813 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812813
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88820816
TypeSNP
SNP AllelesT/G
Probe 1AX-89812813.AX-89812813: CTAGTCACATCATATGGAACTGAAACTCCT
5' Flanking SequenceAAGTCGATCAGTGTAGTATACCTTGACTTTGAGGA
3' Flanking SequenceGGTTCCGTCAGCAAGATGCACCAGCTTTAAGCAGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812813 ID=AX-89812813; Name=AX-89812813; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAGTCGATCAGTGTAGTATACCTTGACTTTGAGGAKGGTTCCGTCAGCAA
GATGCACCAGCTTTAAGCAGC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:3260748..3260811+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:11182158..11182221+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:13316576..13316646+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:13312957..13313001+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:6778080..6778136+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4-3 chromosome Fvb4-3:24334860..24334923+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-4 chromosome Fvb2-4:11948112..11948158+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:9238868..9238931+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:6119702..6119758+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:11903006..11903069- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:10868564..10868634- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:3194797..3194797. Fragaria vesca Whole Genome v1.1 Assembly & Annotation