AX-89812864, AX-89812864 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812864
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821972
TypeSNP
SNP AllelesA/C
Probe 1AX-89812864.AX-89812864: AAGGAACGAGAAGCATTTACCATGGGTAGG
5' Flanking SequenceGCTTCTTCCTTGCTCTTCGTAAATGGTACCCATCC
3' Flanking SequenceTTCAGCCAGAGATGGAATTCCGCTGCTTTGTAAGG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812864 ID=AX-89812864; Name=AX-89812864; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCTTCTTCCTTGCTCTTCGTAAATGGTACCCATCCMTTCAGCCAGAGATG
GAATTCCGCTGCTTTGTAAGG
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:9794094..9794164+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:9795559..9795624+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-3 chromosome Fvb2-3:12394304..12394374+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:12395628..12395693+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:11601639..11601709+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:11603101..11603166+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-4 chromosome Fvb2-4:11399425..11399495- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-4 chromosome Fvb2-4:11397988..11398053- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:6221671..6221671. Fragaria vesca Whole Genome v1.1 Assembly & Annotation