AX-89812865, AX-89812865 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812865
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88821976
TypeSNP
SNP AllelesT/G
Probe 1AX-89812865.AX-89812865: AAAGTTCACCAAACTCAGTAGTAATGGCGT
5' Flanking SequenceAACCTTTTCAAGTGGTTTGAGTCATCATTACCGCA
3' Flanking SequenceGGGTCATTTCTCTTTCGAGTGGTGTTGCTCTCCTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812865 ID=AX-89812865; Name=AX-89812865; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AACCTTTTCAAGTGGTTTGAGTCATCATTACCGCAKGGGTCATTTCTCTT
TCGAGTGGTGTTGCTCTCCTG
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:9800391..9800461+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:12860448..12860518+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-2 chromosome Fvb2-2:11609639..11609709+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:21966594..21966635- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:16332298..16332368- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:6227968..6227968. Fragaria vesca Whole Genome v1.1 Assembly & Annotation