AX-89812917, AX-89812917 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812917
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88823078
TypeSNP
SNP AllelesT/G
Probe 1AX-89812917.AX-89812917: TTCCTTGTCGAAGAGAAGAACCAATGACGG
5' Flanking SequenceCAGAAAAGGAACAGCTTCTCTTCTTGGTTACTGCC
3' Flanking SequenceGTACATGCTGGAGACACCAGCTTTATGTCAAGCAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812917 ID=AX-89812917; Name=AX-89812917; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAGAAAAGGAACAGCTTCTCTTCTTGGTTACTGCCKGTACATGCTGGAGA
CACCAGCTTTATGTCAAGCAA
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:12723804..12723874+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:6973665..6973735+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:16437238..16437308- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:23424408..23424477- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG2 chromosome LG2:9135681..9135681. Fragaria vesca Whole Genome v1.1 Assembly & Annotation