AX-89871559, AX-89871559 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89871559
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88884743
TypeSNP
SNP AllelesA/C
Probe 1AX-89871559.AX-89871559: CTAGGACAACTTGCAGGAGCTTTCCGACGG
5' Flanking SequenceTCTAGGCTACTGGTCAACATGCAATCCGTTTTAGC
3' Flanking SequenceGGCAGCCTTTCGAGGACGTTCAACAGGATCGGTGG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A61.01AX-89871559View
Sequence
>AX-89871559 ID=AX-89871559; Name=AX-89871559; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCTAGGCTACTGGTCAACATGCAATCCGTTTTAGCMGGCAGCCTTTCGAG
GACGTTCAACAGGATCGGTGG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27128621..27128691+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG6 chromosome LG6:26992321..26992321. Fragaria vesca Whole Genome v1.1 Assembly & Annotation