AX-89806427, AX-89806427 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89806427
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88810424
TypeIndel
Probe 1AX-89806427.AX-89806427: CTTTAACTTTACGACGTGTGTTTATTGTAG
5' Flanking SequenceTCCCATCTGAAATTGAAATGCTGCACACAAATAAC
3' Flanking SequenceATCAGTATCACCATGTTCATCACACATACACATAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Fragaria-Fii1N/A20.48AX-89806427View
Sequence
>AX-89806427 ID=AX-89806427; Name=AX-89806427; organism=Fragaria x ananassa; type=genetic_marker; length=78bp
TCCCATCTGAAATTGAAATGCTGCACACAAATAAC[-/ATCG]ATCAGTA
TCACCATGTTCATCACACATACACATAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:1642281..1642350- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:1495477..1495546- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:1539788..1539857- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4095523..4095591- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:26093791..26093860- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:2382500..2382500. Fragaria vesca Whole Genome v1.1 Assembly & Annotation