AX-89808228, AX-89808228 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89808228
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88883199
TypeIndel
Probe 1AX-89808228.AX-89808228: GCTGTACTCGAGTCGTGTGTCACTTAGATG
5' Flanking SequenceAAAGTTTATCGACATGAGCTCAGCACACAGTGAAT
3' Flanking SequenceCTACCTCAGCCTCAACTGAAAGCGGAAAGTTATGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A50.03AX-89808228View
Sequence
>AX-89808228 ID=AX-89808228; Name=AX-89808228; organism=Fragaria x ananassa; type=genetic_marker; length=77bp
AAAGTTTATCGACATGAGCTCAGCACACAGTGAAT[-/CTA]CTACCTCA
GCCTCAACTGAAAGCGGAAAGTTATGT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:22619588..22619657+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-3 chromosome Fvb6-3:15223338..15223407- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:6169771..6169823- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:15784200..15784269- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:23158375..23158375. Fragaria vesca Whole Genome v1.1 Assembly & Annotation