AX-89862023, AX-89862023 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89862023
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88883909
TypeIndel
Probe 1AX-89862023.AX-89862023: AGGGACTAATTAACTGTTTATTAATATTGC
5' Flanking SequenceGGGCAAATAAAAAAGGTCGGCAATGTAAGTCTGTC
3' Flanking SequenceCGTTATAATTATTTGTCAATTAATCAGGGAGTGAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A57.55AX-89862023View
Sequence
>AX-89862023 ID=AX-89862023; Name=AX-89862023; organism=Fragaria x ananassa; type=genetic_marker; length=77bp
GGGCAAATAAAAAAGGTCGGCAATGTAAGTCTGTC[-/CTT]CGTTATAA
TTATTTGTCAATTAATCAGGGAGTGAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:25357237..25357309- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:24558938..24559001- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:3643089..3643161- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:25047512..25047512. Fragaria vesca Whole Genome v1.1 Assembly & Annotation