AX-89808293, AX-89808293 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89808293
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88885119
TypeIndel
Probe 1AX-89808293.AX-89808293: CGAAACAGATCAGTTGAATCCACCTGGTTA
5' Flanking SequenceGAGGTCCTGCTTTGTCTAGTCAACTTAGGTGGACC
3' Flanking SequenceAATGTAGTTCTTATATATTCTAGATGATGTCTAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A63.73AX-89808293View
Sequence
>AX-89808293 ID=AX-89808293; Name=AX-89808293; organism=Fragaria x ananassa; type=genetic_marker; length=78bp
GAGGTCCTGCTTTGTCTAGTCAACTTAGGTGGACC[-/AATT]AATGTAG
TTCTTATATATTCTAGATGATGTCTAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:27932663..27932732+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:1522304..1522373- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11019926..11019995- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:11163671..11163740- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:27796362..27796362. Fragaria vesca Whole Genome v1.1 Assembly & Annotation