AX-89805623, AX-89805623 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89805623
Genbank IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88887994
TypeIndel
Probe 1AX-89805623.AX-89805623: CAAAATAAAAAAGATTAAAGATTGATTTAT
5' Flanking SequenceGCATTTTGGGTTTTATTTTTTCTAATTTCTAACTA
3' Flanking SequenceAATAGTGTTGATGTCATAATGTTGTTTGATTTGAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A83.06AX-89805623View
Sequence
>AX-89805623 ID=AX-89805623; Name=AX-89805623; organism=Fragaria x ananassa; type=genetic_marker; length=77bp
GCATTTTGGGTTTTATTTTTTCTAATTTCTAACTA[-/AAT]AATAGTGT
TGATGTCATAATGTTGTTTGATTTGAT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:34688017..34688089+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:33222302..33222371+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:31181305..31181377- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:4385952..4386024- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:32960631..32960631. Fragaria vesca Whole Genome v1.1 Assembly & Annotation