AX-89915462, AX-89915462 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89915462
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88904022
TypeSNP
SNP AllelesA/G
Probe 1AX-89915462.AX-89915462_probe1: TCCCGTACTGTAACGAACTACTACCTTTTA
Probe 2AX-89915462.AX-89909599_probe2: TCCCGTACTGTAACGAACTACTACCTTTTG
5' Flanking SequenceTCCATTGTTGGGAGCCAGGCTGTCATAACTGCCAC
3' Flanking SequenceTTTTCCATCATCAAGCAATGTCATGCCCTTGGTTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentmSNP (multi-allelic SNPs)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89915462 ID=AX-89915462; Name=AX-89915462; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCCATTGTTGGGAGCCAGGCTGTCATAACTGCCACRTTTTCCATCATCAA
GCAATGTCATGCCCTTGGTTG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:38811731..38811801+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:2163285..2163355+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:27259829..27259899+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:584422..584492+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:584288..584358- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:27355611..27355681- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG6 chromosome LG6:38101519..38101519. Fragaria vesca Whole Genome v1.1 Assembly & Annotation