AX-89817656, AX-89817656 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89817656
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88810722
TypeSNP
SNP AllelesT/G
Probe 1AX-89817656.AX-89817656: TGTAATTACTCTTCGCGGAGTCCTTGTTAC
5' Flanking SequenceCACCAACATTAATGAGAAGCGCCTCAGGAACAATG
3' Flanking SequenceGAGCCCTAAACCATTGATCATCTTTCAGAAATTGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Fvb1chromosomeFvb1:1156355..1156425 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:1141368..1141438 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:1143208..1143278 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1chromosomeFvb1:1134733..1134803 -Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotationn/a
Fvb1-3chromosomeFvb1-3:1173735..1173805 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-3chromosomeFvb1-3:1186623..1186693 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-3chromosomeFvb1-3:1183621..1183691 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-3chromosomeFvb1-3:1178152..1178222 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-2chromosomeFvb1-2:4374482..4374552 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:26446952..26447022 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:26470056..26470126 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:26475472..26475542 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:26468210..26468280 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-1chromosomeFvb1-1:26472479..26472549 +Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-4chromosomeFvb1-4:1877494..1877564 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-4chromosomeFvb1-4:1842036..1842106 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
Fvb1-4chromosomeFvb1-4:1843925..1843995 -Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1n/a
LG1chromosomeLG1:2868426..2868426 .Fragaria vesca Whole Genome v1.1 Assembly & Annotationn/a
Sequence
>AX-89817656 ID=AX-89817656; Name=AX-89817656; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CACCAACATTAATGAGAAGCGCCTCAGGAACAATGKGAGCCCTAAACCAT
TGATCATCTTTCAGAAATTGA