AX-89873395, AX-89873395 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89873395
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88816347
TypeSNP
SNP AllelesT/C
Probe 1AX-89873395.AX-89873395: TGGAGAGAAATATGAACACTGTTTGTAAAC
5' Flanking SequenceAGATTATACACAAAAACAATCTCCGACAGGAATTC
3' Flanking SequenceCAAATGTTTGTCACAAGTATAAAGAGAGGTACTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Strawberry-HK-F1-SNPLG6DN/A18.08AX-89873395View
Sequence
>AX-89873395 ID=AX-89873395; Name=AX-89873395; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGATTATACACAAAAACAATCTCCGACAGGAATTCYCAAATGTTTGTCAC
AAGTATAAAGAGAGGTACTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:4228703..4228773+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:24831693..24831763+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:37487310..37487380- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:31940808..31940878- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:13537690..13537690. Fragaria vesca Whole Genome v1.1 Assembly & Annotation