AX-89824822, AX-89824822 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89824822
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88840338
TypeSNP
SNP AllelesT/C
Probe 1AX-89824822.AX-89824822: TTTATACTGTGCCAACACGGTGTGCTTCTC
5' Flanking SequenceCTGCAAAATATGACACGGTTGTGCCACACGAAGAG
3' Flanking SequenceATTGTAACCATAAACGGTCAATTTCCCGGGCCTCG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89824822 ID=AX-89824822; Name=AX-89824822; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTGCAAAATATGACACGGTTGTGCCACACGAAGAGYATTGTAACCATAAA
CGGTCAATTTCCCGGGCCTCG
Alignments
Feature NameTypeLocationAnalysis
Fvb3 chromosome Fvb3:18279606..18279676+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:25029114..25029184+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-3 chromosome Fvb3-3:22164992..22165062+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:23904620..23904690+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:7188876..7188946+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:26162632..26162702- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:7649573..7649643- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:6826357..6826427- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:22279314..22279384- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:24016353..24016423- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:7323619..7323689- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG3 chromosome LG3:19435766..19435766. Fragaria vesca Whole Genome v1.1 Assembly & Annotation